fixed test for ggplot2 objects to address
https://github.com/tidyverse/ggplot2/issues/6498
fixed additional warnings for using .data in tidyselect
fixed warning for using @docType “package”
sedproxy 0.7.5.1
fix bug in mixed layer modelling where top of core is assumed to be
age == 0
sedproxy 0.7.5
depend on R >= 3.5.0
remove tidyverse from suggests
move Shiny code to new package
https://github.com/EarthSystemDiagnostics/shinysedproxy
wrap stat::time() in as.numeric() to speed up %in% comparison
sedproxy 0.7.4
fix bug in ChunkMatrix where if a single timepoint is selected it
would be off by one
fix bug in BioturbationWeights to allow very small mixing depths
with zero layer thickness
fix bug in assigning points to the mixed layer when timepoint are
not in increasing age order
sedproxy 0.7.3
refactor and rename growth rate function to be more intuitive
sedproxy 0.7.2
modifications to pass R CMD check
depend on R >= 4.0.0
sedproxy 0.7.1
set growth to zero at temperatures below -2°C in growth_rate_l09_R
(FAME)
sedproxy 0.7.0
feature - allow simulation of proxy in mixed layer
sedproxy 0.6.6
bugfix - allow duplicated requested timepoints
additionally include n.samples in output
sedproxy 0.6.5
bugfix - fix case where bio.depth and layer width both == 0, single
row of clim.signal should be used for each requested timepoint
sedproxy 0.6.4
implement growth rate threshold in growth_rate_l09_R (FAME)
sedproxy 0.6.2
fixed calibration parameters attribute
sedproxy 0.6.1
Release version for final copy edited version of CoTP paper
Repository moved to Github
sedproxy 0.6
Fast version of ClimToProxyClim called internally when parameters
are time-invariant
Bugfix to calculation of bioturbation weights when layer.width ==
0
Other performance improvements
Basic unit tests to detect changes to output for a standard
simulation
sedproxy 0.5.0
Release version for revised CoTP Discussion paper
Can now use dynamic habitat weights
Now has explicit sensor stage with conversion from temperature to
Mg/Ca or Uk’37 units
Habitat weights can be calculated using temperature response
function and parameterisation from FAME 1.0 module
Calibration uncertainty modelled via sampling parameters from fitted
calibration regression model for each replicate
sedproxy 0.4.0
Release version for CoTP Discussion paper
sedproxy 0.3.1
Added a NEWS.md file to track changes to the
package.
ClimToProxyClim now takes a ts object for the input climate
signal.
Bioturbation weights now take the thickness of the layer from which
samples were picked/extracted into account when determining the time
period over which a proxy integrates the climate signal. This is
controlled by the new argument layer.width