removing
checkDepPackageVersion(dep_pkg="Matrix", this_pkg="TMB")
from .onLoad() as requested by K. Kristensen
phylosem 1.1.3
Removing fit_tmb to simplify code and remove unnecessary
warnings
Adding codecov and extra tests
Fixing R-CMD-check to force build Matrix/TMB from source
phylosem 1.1.2
Adding new functions to provide warning if Matrix version doesn’t
match what’s expected by TMB
phylosem 1.1.1
Re-adding phylosignal as SUGGESTS
Re-adding phylosignal to Fisheries vignette
adding arguemnt what to as_phylo4d to
allow easy extraction of standard errors
phylosem 1.1.0
Adding new S3 generic functions: logLik and vcov
Adding vignette “fisheries” associated with paper “Trees for fishes:
The neglected role for phylogenetic comparative methods in fisheries
science” accepted at Fish and Fisheries
phylosem 1.0.2
Fixed bug arising when data are missing for observations in the
earliest tips and for the first inputted variable
Updating vignette to show confidence intervals on alpha/kappa/lambda
as well as lnalppha/lnkappa/logitlambda
phylosem 1.0.1
Address request from CRAN to use Suggests packages conditionally in
examples
Continuing to use Suggests packages unconditionally in vignettes
based on Wickham guidance online