High-Performance Open-Source Archive
load_atlas_tree() — fetch a standardized Newick tree
from the Phylo-Species Atlas, optionally resolving integer tip IDs to
species names via the shared dictionary.list_trees() — data frame of every tree in the atlas
with provenance fields (study, year, journal, DOI, coverage).atlas_info() — single-row provenance for a tree by
name.atlas_clear_cache() — drop the in-session
dictionary/metadata cache.phyloatlas.base_url
option.inst/extdata/ so
examples and tests run without network access.
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