Add logo/favicons from Grok-3,
huggingface.co/spaces/not-lain/background-removal, and
usethis::use_logo() (jpg), DjVuLibre/3.5.28, ImageMagick/7.1.1-31 (png),
and pkgdown::build_favicons().
Add reference to swath_ms.
Amend {r refdata} with eval=requireNamespace(“EnsDb.Hsapiens.v75”,
quietly=TRUE)
Drop GitHub in _pkgdown.yml.
Revise URL in inst/README.md.
Revise pQTLdata.Rmd using ‘CairoPNG’ and options().
Revise DESCRIPTION/(Title, URL), README.Rmd after CRAN
publication.
pQTLdata 0.5
(2025/3/5)
Add README.Rmd so as to extract DESCRIPTION/Description to
README.md.
Automate knitr::knit(“README.Rmd”);devtools::document() and
pkgdown::build_site().
Revise DESCRIPTION/pQTLdata.R(md)/inst/scripts (suggested by Beni
Altmann).
Revise _pkgdown.yml.
pQTLdata 0.4
(2025/3/2)
CRAN submission
Extend Description and add seer1980 to data/datalist.
pQTLdata 0.3
(2025/2/20)
Add Olink-Target-96-Assay-List.xlsx (15 panels).
Drop olink-explore-ht-assay-list-2023-07-12.xlsx (5,343) for
olink-explore-ht-assay-list.xlsx (5,416=5,400+).
Add single quotes to software names in Title/Description inside
DESCRIPTION (suggested by Uwe Ligges).
Minor changes including splitting utils.R and vignette.
pQTLdata 0.2
(2025/2/19)
Remove biomaRt, hg19, hg19Tables, st[4|6|18] except their R scripts
and revise vignette.
Add Ensembl gene ID to caprion & URL to DESCRIPTION but simplify
inst/scripts/docs.sh.
Add Information on Thermo Fisher Scientific - LSMS / NCI Proteomic
Data Commons.
Add/remove information for Olink® Target 96 Inflammation
Panels.
Add inst/README.md, SomaLogic/ given SomaScan.db is developed.
pQTLdata 0.1
(2024/06/10)
Add
Olink/, EndNote/, scripts/ to inst/.
caprion.rda and caprion.R.
seer1980.rda and seer1980.R.
biomaRt.rda, hg19.rda, hg19Tables.rda, inf1.rda, scallop_inf1,
st4.rda, st6.rda, st18.rda, but drop hgTables. Q8NF90 and Q8WWJ7 in
inf1.rda were not listed at the UCSC, and replaced with P12034 and
P30203 as on UniProt.
SomaScan lookup (panels, box, ST4, ST6).
Remove characters with iconv.
Adopt pkgdown, bookdown-driven vignette, a 1/10 version increment
algorithm.