Bug fix to how taxize results are handled by
occCite::taxonomicRectification().
Documentation now specifies how taxize results are
handled more explicitly.
Test files edited to ensure stability after above bug fix.
Removed waffle from Suggests, made waffle
utilization more optional.
occCite 0.6.1
Moved waffle to Suggested package, as it is now
orphaned.
plot.occCiteData() now automatically skips source and
aggregator plots if waffle is unavailable.
Small bug fixes.
occCite 0.6.0
Updated for compatibility with major ggplot2 update;
back-compatibility maintained.
Restored taxize functionality as a Suggested
package.
Improved test coverage.
occCite 0.5.9
Commented out dependencies on taxize package. Taxonomic
rectification no longer works. It will be reinstated if taxize becomes
available on CRAN.
occCite 0.5.8
Moved taxize package to Suggests, as it is
now orphaned.
studyTaxonList() allows user to skip taxonomic
rectification, which relies on functions from taxize
package. studyTaxonList() automatically skips taxonomic
rectification if taxize is unavailable.
occCite 0.5.7
Fixed warning in occCitation() when getting GBIF
citations
Updated date formatting using format() instead of
as.character()
Updated test files to incorporate rgbif 3.8.0 output changes, make
more efficient
In occResults, renamed “Dataset”, “DatasetKey”, and “DataService” to
“datasetName”, “datasetKey”, “dataService”, respectively.
Made an option for removing package citations
occCite 0.5.6
Added “coordinateUncertaintyInMeters” column in processed occurrence
results table.
occCite 0.5.5
Further adjustment in testing to be CRAN-compatible
occCite 0.5.4
Adjustment to testing strategy to comply with CRAN policies.
Links changed to reflect inclusion on ROpenSci.
occCite 0.5.2
Resubmission after archiving due to dependency archiving.
Functions that rely on getting data from servers via an internet
connection now behave more gracefully and informatively when the server
cannot be reached.
occCite 0.5.1
Minor update to fix a server connection timeout error.
occCite 0.5.0
Legends for source waffle plots are now wrapped to enhance
readability.
Now fails more gracefully if servers cannot be reached.
occCite 0.4.9
In gbifRetriever, changed rgbif::name_suggests to
rgbif::name_backbone. More robust for our purposes.
Now fills in “Dataset” column in GBIF search results from GBIF
citation information.
No longer throws out GBIF occurrences with missing day and month
information.
occCite 0.4.8
Fixed problem with occCitation that caused an error when dataset
keys had no associated BIEN data.
occCite 0.4.7
Internal logic made more robust to various error scenarios.
Now warns user if no taxonomic matches exist for a given name (but
doesn’t crash!).
occCite 0.4.6
Taxonomic sources were renamed in the Global Names Resolver.
occCite 0.4.5
sumFig() function is now a plot method for objects of
class occCiteData.
map.occCite() has been renamed
occCiteMap() to avoid confusion with existing method naming
conventions.
occCite 0.4.0
Removed a package dependency that was causing warnings on some
systems.
Adjusted function behaviors to more gracefully handle species with
no occurrences returned from a search.
occCite 0.3.0
Updated to meet CRAN reviewer guidelines
Citations now include packages used.
occCite 0.2.0
Updated to reflect new object structures returned by searches with
update rgbif, version 3.1.
Examples updated to permit testing when possible.
occCite 0.1.0
Version submitted for evaluation in Ebbe Nielsen Challenge.