High-Performance Open-Source Archive
This function performs genomic prediction of cross performance using genotype and phenotype data. It processes data in several steps including loading necessary software, converting genotype data, processing phenotype data, fitting mixed models, and predicting cross performance based on weighted marker effects. For more information, see Labroo et al. (2023) <doi:10.1007/s00122-023-04377-z>.
| Version: | 0.1.0 |
| Depends: | R (≥ 2.10) |
| Imports: | BiocManager, Rcpp, dplyr, sommer, AGHmatrix, snpStats, VariantAnnotation, tools, magrittr, methods |
| LinkingTo: | Rcpp, RcppArmadillo |
| Suggests: | knitr, rmarkdown, testthat (≥ 3.0.0) |
| Published: | 2024-11-06 |
| DOI: | 10.32614/CRAN.package.gpcp |
| Author: | Marlee Labroo [aut], Christine Nyaga [cre, aut], Lukas Mueller [aut] |
| Maintainer: | Christine Nyaga <cmn92 at cornell.edu> |
| License: | GPL (≥ 3) |
| NeedsCompilation: | yes |
| Materials: | README |
| CRAN checks: | gpcp results |
| Reference manual: | gpcp.html , gpcp.pdf |
| Vignettes: |
Genomic Prediction of Cross Performance with gpcp (source) |
| Package source: | gpcp_0.1.0.tar.gz |
| Windows binaries: | r-devel: gpcp_0.1.0.zip, r-release: gpcp_0.1.0.zip, r-oldrel: gpcp_0.1.0.zip |
| macOS binaries: | r-release (arm64): gpcp_0.1.0.tgz, r-oldrel (arm64): gpcp_0.1.0.tgz, r-release (x86_64): gpcp_0.1.0.tgz, r-oldrel (x86_64): gpcp_0.1.0.tgz |
Please use the canonical form https://CRAN.R-project.org/package=gpcp to link to this page.
Need mirroring services?
Contact our team at info@vpspulse.com.
Mirror powered by VPSpulse
Infrastructure sponsored by VPSPulse & Secure Payments by ArionPay.