High-Performance Open-Source Archive
sig_labels() — runs Kruskal-Wallis + Dunn tests per
facet level and returns a geom_text-ready data frame with
compact letter display (CLD) annotations. Facets where Kruskal-Wallis p
≥ alpha are silently dropped.ks_test() now correctly handles group names that
contain hyphens. Labels were previously corrupted because
cldList splits comparison strings on -; group
names are now sanitised to dots before Dunn testing and restored in the
output.calculate_regression() — function signature updated.
reference_time is replaced by a reference_df
argument (a data frame with measurement start times, site, and analyzer
identifier). New site and analyzer_code
parameters carry metadata through to the output tibble, which now
includes site and analyzer columns.descriptive_statistic() — grouped mean ± SD and min–max
summary table.normality_test_t() — Shapiro-Wilk normality tests (raw,
sqrt, log) for two-group comparisons.normality_test_aov() — Shapiro-Wilk on ANOVA residuals
for one- or two-way designs.aov_test() — one-way ANOVA + Tukey HSD + compact letter
display.ks_test() — Kruskal-Wallis + Dunn post-hoc (Bonferroni)
+ compact letter display.df_trans() — reverse square-root / log data
transformation helper.find_outlier() — IQR-based outlier detection.plot_point(), plot_line(),
plot_box(), plot_bar() — opinionated ggplot2
wrappers with aelab theme.aelab_palettes() — custom colour palette manager (7
built-in palettes).scale_colour_aelab_d(),
scale_fill_aelab_d() — discrete ggplot2 colour/fill
scales.scale_colour_aelab_c(),
scale_fill_aelab_c() — continuous ggplot2 colour/fill
scales.plot_map_taiwan() — Taiwan site map with north arrow
and scale bar.calc_chla_trichromatic() — chlorophyll-a from
trichromatic spectrophotometric absorbance.calculate_MDF() — Minimum Detectable Flux for static
chamber GHG measurements.calculate_total_co2e() — sum GHG fluxes to CO₂e using
IPCC AR6 GWPs.process_weather_month() — import monthly Taiwan weather
station CSV files.combine_weather_month() — batch-import a range of
monthly weather files.convert_ghg_unit() — now accepts character strings
(e.g. “0.002 ± 0.003”) and converts each embedded number; supports wider
unit set (nmol, Mg, µmol,
mol; time: yr, day,
hr, sec, min); returns a named
list list(value, unit) instead of a bare numeric.
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