OmopSketch 1.1.0

• speed up summariseClinicalRecords by @edward-burn in #562
• include delphi by @catalamarti in #574
• add badges in readme by @catalamarti in #575
• Add record duration summary and end-date checks by @cecicampanile in #576
• Add location and provider counts to summarisePerson if less than 15 labels by @catalamarti in #583
• only subjects in person table used in analyses and fixed percentages … by @cecicampanile in #573
• Include standard_vocabulary in summariseClinicalTable by @cecicampanile in #580
• Update plotPerson with all variables by @cecicampanile in #595
• add if column is required in the summariseMissingData by @cecicampanile in #594
• Set legend labels in plotPerson by @cecicampanile in #591
• cumulative plot if density results are available by @cecicampanile in #597
• add standard and source vocabularies to summariseConceptIdCounts by @cecicampanile in #589
• update readme by @cecicampanile in #596
• include type concept id in summariseClinicalRecords by @cecicampanile in #590
• Add ‘end date’ trends in summariseTrend by @cecicampanile in #598
• update documentation by @cecicampanile in #599
• drop temp tables if error occurs by @cecicampanile in #601

OmopSketch 1.0.1

• Remove deprecated internal functions and add tests by @catalamarti in #525
• Update deprecated function tests for specific DB by @catalamarti in #532
• summarieClinicalRecords to work with all clinical tables by @cecicampanile in #533
• update tables and test tables by @cecicampanile in #535
• Improve tableConceptIdCounts.R by @cecicampanile in #538
• dont test database characteristics with age group when cdm is local by @cecicampanile in #540
• plot functions updated by @cecicampanile in #534
• fix integer overflow in sql server by @cecicampanile in #542
• attempt fix for bigint concept count by @edward-burn in #543
• without grouping by @edward-burn in #548
• Update tablePerson.R by @cecicampanile in #550
• separate standard, non standard and 0 in summariseClinicalRecords by @cecicampanile in #547
• Print big int by @cecicampanile in #553
• hide, header and group arguments in tables by @cecicampanile in #551

OmopSketch 1.0.0

• Characterise all mock datasets by @catalamarti #430
• background in shiny by @cecicampanile #431
• shiny name shiny -> OmopSketchShiny by @catalamarti #432
• fix plot of characterisation of population in shiny by @cecicampanile #437
• new function: summariseTrend by @cecicampanile #433
• add cdm_source in summariseOmopSnapshot by @catalamarti #438
• new function: summarisePerson by @catalamarti #440
• summariseObservationPeriod 1.0.0 by @cecicampanile #446
• summariseClinicalRecords 1.0 by @cecicampanile #443
• missingness in shiny characteristics by @cecicampanile #450
• sql translations by @catalamarti #449
• style argument in table and plot functions by @cecicampanile #451
• Fix: Ensure database compatibility for boolean aggregations in summariseNumeric2 by @merqurio #457
• Fix documentation for plotObservationPeriod by @cecicampanile #460
• tableObservationPeriod when byOrder = FALSE by @cecicampanile #459
• summariseObservationPeriod minor fix by @cecicampanile #463
• check for person id not in person table in summariseClinicalRecords by @cecicampanile #461
• fix some test failures by @cecicampanile #469
• In observation argument by @cecicampanile #470
• update shinyCharacteristics #454
• sample to work on the person level by @cecicampanile #458
• tableConceptIdCounts update by @cecicampanile #476
• captions in tables by @cecicampanile #477
• summarisePerson in databaseCharacteristics and shinyCharacteristics by @cecicampanile #478
• Reduce imports by @catalamarti #503
• Remove :: from vignettes, readme and examples by @catalamarti #502
• Use default of style and type = NULL by @catalamarti #498
• Tidy vignettes by @catalamarti i#508
• Tidy documentation by @catalamarti #510
• refine readme by @catalamarti #505
• scarlet brand in shiny by @cecicampanile #513
• Test multiple dbms by @catalamarti #514
• add logo to shiny by @catalamarti #516
• reduce size of tables before collecting in summariseTrend by @cecicampanile #518

OmopSketch 0.5.1

• removed overall results when plotting trends by @cecicampanile #418

OmopSketch 0.5.0

• Table top concept counts by @cecicampanile @catalamarti #392

• summariseTableQuality function by @cecicampanile #396

• specify arguments in examples and deprecate summariseConceptSetCounts by @cecicampanile #397

• In summariseObservationPeriod age computed after trimming to the study period by @cecicampanile #403

• summariseInObservation refactoring by @cecicampanile #390

• fixed warnings in tests by @cecicampanile #399shinyCharacteristics() function by @cecicampanile #401

• observation period functions to work with temp tables by @cecicampanile #400

• eunomia vocabulary in mockOmopSketch.R by @cecicampanile #398

• tableQuality() function by @cecicampanile #406

• summariseTableQuality in databaseCharacteristics() by @cecicampanile #407

• use shinyCharacteristics() to generate the shiny deployed in the website by @cecicampanile #415

• Improve tableClinicalRecords.R by @cecicampanile #417

• Documentation by @cecicampanile #416

OmopSketch 0.4.0

• “sex” and “age” output in summariseInObservation by @cecicampanile #358

• source concept in summariseConceptIdCount and tableConceptIdCounts by @cecicampanile #362t

• ableInObservation and tableRecordCount by @cecicampanile #363

• databaseCharacteristics() function by @cecicampanile #330

• Table Record Count and In Observation by @cecicampanile #363

• Add new examples by @elinrow #376Vignette explaining missing data functions by @elinrow #375

• Update “Summarise observation period” vignette by @cecicampanile #377

• Update “Summarise clinical tables records” by @cecicampanile #378

• Create shiny app with characterisation of synthetic data by @catalamarti #381

• “Summarise concept count” vignette by @cecicampanile #379

• Update vocabulary version in summariseOmopSnapshot() by @cecicampanile #383

OmopSketch 0.3.2

• remove dplyr::compute() from sampleOmopTable() by @cecicampanile #344
• option to summarise by person in summariseInObservation by @cecicampanile #345
• counts of 0 in summariseMissingData by @cecicampanile #346
• x ax ordered by observation period ordinal in plotObservationPeriod by @cecicampanile #348
• byOrdinal boolean argument in summariseObservationPeriod by @cecicampanile #349
• bug that was showing percentages over 100 fixed in summariseClinicalRecords by @cecicampanile #350

OmopSketch 0.3.1

• remove dplyr::collect() from summariseClinicalRecords() by @cecicampanile #328
• bug with time_interval fixed in summariseMissingData() by @cecicampanile #335
• improved tableConceptIdCounts by @cecicampanile #336
• arranged variable_name and variable_level in tableClinicalRecords by @cecicampanile #337

OmopSketch 0.3.0

• eunomiaIsAvailable instead of the deprecated eunomia_is_available by @cecicampanile #316
• Account for int64 in summariseInObservation by @cecicampanile #312
• Add “datatable” as possible table type by @cecicampanile #314
• Interval argument in summariseMissingData and summariseConceptIdCounts, year argument deprecated by @cecicampanile #317
• Only records in observation are accounted in summariseConceptIdCounts and summariseConceptSetCounts by @cecicampanile #319
• vignette with full characterisation and shiny by @cecicampanile #325
• in summariseInObservation and summariseObservationPeriod study range is now applied with cohortConstructor::trimToDateRange instead of requireInDateRange by @cecicampanile #325