HDANOVA

Installation

# Install release version from CRAN  
install.packages("HDANOVA")  
# Install development version from GitHub  
devtools::install_github("khliland/HDANOVA")

HD-ANOVA book

This package contains the main methods described in Age K. Smilde, Federico Marini, Johan A. Westerhuis and Kristian Hovde Liland’s book:

Analysis of Variance for High-Dimensional Data
- Applications in Life, Food and Chemical Sciences

Published by Wiley in August 2025.

Contents

• Main methods:
  • ASCA+ - Analysis of Variance Simultaneous Component Analysis
  • APCA+ - ANOVA Principal Component Analysis
  • APLS+ - ANOVA Partial Least Squares
  • LiMM-PCA - Linear Mixed Model PCA
  • MSCA - Multilevel Simultaneous Component Analysis
  • PC-ANOVA - Principal Component Analysis of Variance
  • PRC - Principal Response Curves
  • PERMANOVA - Permutation Based MANOVA
• A selection of datasets
• Common framework and plotting routines