Reduced installed package size by (i) removing prebuilt vignette
artifacts from the source package, (ii) replacing large inst/extdata
files with compressed xz data.
Improved vignette compliance with CRAN policies by removing the
BiocStyle dependency.
EHRtemporalVariability 1.2.1
Updated plotDataTemporalMap function to conform to new
specifications of the order() function to avoid possible warning or
error when plotting character or factor data in alphabetical order.
EHRtemporalVariability 1.2.0
Updated to R 4.3.0.
Fixed CRAN requirement to message when used Internet resources are
not available or have changed.
Use of inherits() to replace conditions comparing class() to
string.
EHRtemporalVariability 1.1.4
Added time series plot as an alternative to heat map. This can be
selected in the plotDataTemporalMap function using the new
mode parameter.
EHRtemporalVariability 1.1.3
Fixed issue when a numerical input column has all its values as
missing.
Fixed issue when showing warning at kernel density estimation with
less than 4 values.
Added help to IGTProjection class.
EHRtemporalVariability 1.1.2
Added webshot package to suggest list in DESCRIPTION to
avoid Vignette compilation issues.
EHRtemporalVariability 1.1.1
Fixed issues when plotting IGT projections trajectories by filtering
by date or at weekly period.
EHRtemporalVariability 1.1.0
Added function estimateIGTTrajectory to estimate a
trajectory of the information temporal evolution in a IGT projection by
fitting a cubic smoothing spline.
The plotIGTProjection function now allows plotting the
information trajectory using the optional trajectory
parameter.
Updated the estimateIGTProjection function to allow
non-metric multidimensional scaling in addition to classical. To do so
use the new embeddingType function parameter.
The dimensionality reduction loss for both non-metric (stress) and
metric (1-GOF) multidimensional scaling is now returned by the
estimateIGTProjection function.
The vignette has been extended to describe how to interpret temporal
changes in IGT projections. This included how to use clustering methods
in IGT projections to help delineate temporal subgroups. Other updates
related to this version were included too.
Fixed warning in icd9toPheWAS when the input ICD-9 variable was a
factor.
Fixed a typo and a warning in the vignette.
EHRtemporalVariability 1.0.4
Fixed bug in the estimateDataTemporalMap function where an expected
Date was POSIXt instead when using newer versions of zoo and R
package.
EHRtemporalVariability 1.0.3
Fixed bug when plotting IGT projections at a weekly period.
Removed no longer used plotly buttons to suppress warnings.
EHRtemporalVariability 1.0.2
Description texts, references and vignette have been fixed and
updated.
EHRtemporalVariability 1.0.1
Bug fixes
Fixed help for the manual generation of a
DataTemporalMap class using S4 new()
constructor.
Removed unnecessary imports to reduce installation load.