Add barplot with Cell count or percentage of metadata in the Shiny
context.
Add option to combine (split) metadata and dynamically create a new
metadata column in the Shiny context.
Add option to calculate the percentage of cells expressing gene
above a threshold in the summary table from the Shiny Violin
section.
Add hierarchical plot that shows the relationship between partitions
with different number of clusters.
Add the option to create the ClustAssess app without the need to run
the stability assessment (the light version). If the clustassess
parameter is NULL, the app will contain only the ‘Comparison’ tab. In
this case, the user should provide the UMAP coordinates in the metadata
dataframe.
Fixes
Fix the case in write_object when the gene variance
filtering leaves the chunk with one or zero genes.
Stop allowing the user to calculate the ECC or perform the merging
to a list with less than two partitions by raising an exception.
Sort the k values numerically in the merge_resolutions
function.