VPSPulse Mirrors
High-Performance Open-Source Archive
NEWS
CRMetrics 0.3.3
- Added functionality for 10x Flex, Parse, 10x multiome
- Added ‘technology’ flag when creating R6 object
- Added plotBarcodeRankPlot
- Added plotRawDepth
- Added ‘depth.cutoff.upper’ flag for plotEmbedding,
plotFilteredCells, filterCms
CRMetrics 0.3.2
- Fixed error in
plotFilteredCells
- Added author e-mail (missing)
CRMetrics 0.3.1
- Minor bug fix for issue #52
CRMetrics 0.3.0
- Several minor bug fixes
- Updated
createEmbedding upon resolve of
https://github.com/kharchenkolab/conos/issues/123
- Updated DESCRIPTION
- Added checks for
detectDoublets
- Added possibility for multiple paths for “data.path” argument in
initialize
- Changed depth calculation from Conos depth to raw depth, i.e.,
column sums
- Added plotting palette to object through argument
pal
- Fixed bug for
filterCms where species was
not forwarded to getMitoFraction internally
- Moved adding list of CMs to CRMetrics object from
addDetailedMetrics() to addCms() since this is more logical
detectDoublets can now export Python script with
argument export = TRUE- Added
addDoublets function to add doublet results
generated with exported Python scripts
- Updated vignette
CRMetrics 0.2.3
- Updated tests and examples to pass CRAN checks
CRMetrics 0.2.2
- Prepared for submission to CRAN
CRMetrics 0.2.1
- Added a
NEWS.md file to track changes to the
package.