<?xml version="1.0" encoding="UTF-8"?>
<oai_dc:dc xmlns:oai_dc="http://www.openarchives.org/OAI/2.0/oai_dc/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.openarchives.org/OAI/2.0/oai_dc/ http://www.openarchives.org/OAI/2.0/oai_dc.xsd">
  <dc:title>Optimal, Fast, and Reproducible Univariate Clustering</dc:title>
  <dc:title>R package Ckmeans.1d.dp version 4.3.5</dc:title>
  <dc:description>Fast, optimal, and reproducible weighted univariate
 clustering by dynamic programming. Four problems are solved, including
 univariate k-means (Wang &amp; Song 2011) &lt;doi:10.32614/RJ-2011-015&gt;
 (Song &amp; Zhong 2020) &lt;doi:10.1093/bioinformatics/btaa613&gt;, k-median,
 k-segments, and multi-channel weighted k-means. Dynamic programming
 is used to minimize the sum of (weighted) within-cluster distances
 using respective metrics. Its advantage over heuristic clustering in
 efficiency and accuracy is pronounced when there are many clusters.
 Multi-channel weighted k-means groups multiple univariate
 signals into k clusters. An auxiliary function generates histograms
 adaptive to patterns in data. This package provides a powerful set
 of tools for univariate data analysis with guaranteed optimality,
 efficiency, and reproducibility, useful for peak calling on temporal,
 spatial, and spectral data.</dc:description>
  <dc:type>Software</dc:type>
  <dc:relation>Imports: Rcpp, Rdpack (&gt;= 0.6-1)</dc:relation>
  <dc:relation>LinkingTo: Rcpp</dc:relation>
  <dc:relation>Suggests: testthat, knitr, rmarkdown, RColorBrewer</dc:relation>
  <dc:creator>Joe Song &lt;joemsong@cs.nmsu.edu&gt;</dc:creator>
  <dc:publisher>Comprehensive R Archive Network (CRAN)</dc:publisher>
  <dc:contributor>Joe Song [aut, cre] (ORCID: &lt;https://orcid.org/0000-0002-6883-6547&gt;),
  Hua Zhong [aut] (ORCID: &lt;https://orcid.org/0000-0003-1962-2603&gt;),
  Haizhou Wang [aut]</dc:contributor>
  <dc:rights>LGPL (&gt;= 3)</dc:rights>
  <dc:date>2023-08-19</dc:date>
  <dc:format>application/tgz</dc:format>
  <dc:identifier>https://CRAN.R-project.org/package=Ckmeans.1d.dp</dc:identifier>
  <dc:identifier>doi:10.32614/CRAN.package.Ckmeans.1d.dp</dc:identifier>
</oai_dc:dc>
