A Versatile Toolkit for Copy Number Variation Relationship Data Analysis and Visualization R package CNVScope version 3.7.2 Provides the ability to create interaction maps, discover CNV map domains (edges), gene annotate interactions, and create interactive visualizations of these CNV interaction maps. Software Depends: R (>= 4.1.0),ggplot2 Imports: tidyr,reshape2,magrittr, jointseg,shiny,RCurl,foreach, GenomicInteractions,Matrix,OpenImageR,biomaRt,matrixStats, plyr,data.table,dplyr, doParallel,stringr,rtracklayer,Hmisc Suggests: knitr, remotes,pwr,ComplexHeatmap,rmarkdown, HiCseg,igraph,visNetwork,circlize,plotly, InteractionSet,GenomicRanges,GenomicFeatures,IRanges,rslurm, shinythemes,shinycssloaders,DT,logging,heatmaply, S4Vectors,BiocManager,shinyjs,htmltools,htmlwidgets, GenomeInfoDb,BSgenome.Hsapiens.UCSC.hg19,tibble,smoothie James Dalgleish <james.dalgleish@nih.gov> Comprehensive R Archive Network (CRAN) James Dalgeish, Yonghong Wang, Jack Zhu, Paul Meltzer BSD_3_clause + file LICENSE (https://CRAN.R-project.org/package=CNVScope/LICENSE) 2022-03-30 application/tgz https://CRAN.R-project.org/package=CNVScope doi:10.32614/CRAN.package.CNVScope