Analysis of Copy Number Signatures R package CNSigs version 0.1.0 A workflow to generate and analyze signatures based on copy number data using non-negative matrix factorization (NMF) in an approach similar to that used in mutational signatures. It can be used to extract features from Copy number segment data and use that to find a subset of copy number signatures which can be further used to correlate with other relevant data. For more on 'NMF' see Gaujoux (2013) <doi:10.1186/1471-2105-11-367>. Software Depends: R (>= 2.10), NMF Imports: methods, doParallel, foreach, flexmix, limSolve, ggplot2, snow, cowplot, pheatmap, RColorBrewer, viridisLite, colorspace, stats, utils Suggests: knitr, rmarkdown Shawn Striker <striker.35@osu.edu> Comprehensive R Archive Network (CRAN) David Tallman [aut], Shawn Striker [cre, ctb], Daniel Stover [cph] MIT + file LICENSE (https://CRAN.R-project.org/package=CNSigs/LICENSE) 2026-01-08 application/tgz https://CRAN.R-project.org/package=CNSigs doi:10.32614/CRAN.package.CNSigs