Visualization of Clonal Expansion for Single Cell Immune Profiles R package APackOfTheClones version 1.3.0 Visualize clonal expansion via circle-packing. 'APackOfTheClones' extends 'scRepertoire' to produce a publication-ready visualization of clonal expansion at a single cell resolution, by representing expanded clones as differently sized circles. The method was originally implemented by Murray Christian and Ben Murrell in the following immunology study: Ma et al. (2021) <doi:10.1126/sciimmunol.abg6356>. Software Depends: R (>= 4.1.0) Imports: assertthat, dplyr, ggforce, ggplot2, hash, lifecycle, magrittr, methods, Rcpp, rlang, Seurat, SeuratObject LinkingTo: Rcpp Suggests: cowplot, covr, knitr, rmarkdown, spelling, testthat (>= 3.0.0), vdiffr, colorspace Qile Yang <qile.yang@berkeley.edu> Comprehensive R Archive Network (CRAN) Qile Yang [cre, aut, cph] (ORCID: <https://orcid.org/0009-0005-0148-2499>) MIT + file LICENSE (https://CRAN.R-project.org/package=APackOfTheClones/LICENSE) 2025-08-18 application/tgz https://CRAN.R-project.org/package=APackOfTheClones doi:10.32614/CRAN.package.APackOfTheClones en-US