VPSPulse Mirrors

High-Performance Open-Source Archive

CRAN Package Check Results for Package lmSubsets

CRAN Package Check Results for Package lmSubsets

Last updated on 2026-06-14 05:50:24 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.5-4 12.44 62.69 75.13 OK
r-devel-linux-x86_64-debian-gcc 0.5-4 7.69 51.13 58.82 OK
r-devel-linux-x86_64-fedora-clang 0.5-4 18.00 103.99 121.99 OK
r-devel-linux-x86_64-fedora-gcc 0.5-4 19.00 106.56 125.56 OK
r-devel-windows-x86_64 0.5-4 13.00 151.00 164.00 OK
r-patched-linux-x86_64 0.5-4 11.06 59.59 70.65 OK
r-release-linux-x86_64 0.5-4 11.19 54.84 66.03 ERROR
r-release-macos-arm64 0.5-4 3.00 25.00 28.00 OK
r-release-macos-x86_64 0.5-4 8.00 131.00 139.00 OK
r-release-windows-x86_64 0.5-4 14.00 152.00 166.00 OK
r-oldrel-macos-arm64 0.5-4 2.00 41.00 43.00 OK
r-oldrel-macos-x86_64 0.5-4 8.00 135.00 143.00 OK
r-oldrel-windows-x86_64 0.5-4 16.00 152.00 168.00 OK

Check Details

Version: 0.5-4
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘lmSubsets.Rnw’ using Sweave --- finished re-building ‘lmSubsets.Rnw’ make[1]: Entering directory '/home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/lmSubsets.Rcheck/vign_test/lmSubsets/vignettes' pdflatex --shell-escape lmSubsets This is pdfTeX, Version 3.141592653-2.6-1.40.29 (TeX Live 2026/Debian) (preloaded format=pdflatex) \write18 enabled. entering extended mode (./lmSubsets.tex LaTeX2e <2025-11-01> L3 programming layer <2026-05-15> (/home/hornik/tmp/R.check/r-release-gcc/Work/build/share/texmf/tex/latex/jss.cl s Document Class: jss 2023/03/05 3.4 jss class by Achim Zeileis (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2025/01/22 v1.4n Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size11.clo)) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) (/usr/share/texlive/texmf-dist/tex/latex/xcolor/xcolor.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics/mathcolor.ltx)) (/usr/share/texlive/texmf-dist/tex/latex/fancyvrb/fancyvrb.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/fontenc.sty) (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty (/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty)) (/usr/share/texmf/tex/latex/lm/lmodern.sty) (/usr/share/texlive/texmf-dist/tex/latex/natbib/natbib.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty) (/usr/share/texlive/texmf-dist/tex/latex/kvsetkeys/kvsetkeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty (/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty (/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty))) (/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty) (/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty (/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty))) (/usr/share/texlive/texmf-dist/tex/latex/etoolbox/etoolbox.sty) (/usr/share/texlive/texmf-dist/tex/generic/stringenc/stringenc.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty (/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty))) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty (/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty)))) (/usr/share/texlive/texmf-dist/tex/latex/auto-pst-pdf/auto-pst-pdf.sty (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty) (/usr/share/texlive/texmf-dist/tex/latex/xkeyval/xkeyval.sty (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/xkeyval.tex (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/xkvutils.tex))) (/usr/share/texlive/texmf-dist/tex/latex/ifplatform/ifplatform.sty (/usr/share/texlive/texmf-dist/tex/latex/tools/shellesc.sty) (/usr/share/texlive/texmf-dist/tex/generic/catchfile/catchfile.sty (/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty)) (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifluatex.sty) (./lmSubsets.w18 )) ------------------------------------------------- auto-pst-pdf: Auxiliary LaTeX compilation ------------------------------------------------- This is pdfTeX, Version 3.141592653-2.6-1.40.29 (TeX Live 2026/Debian) (preloaded format=latex) entering extended mode ------------------------------------------------- auto-pst-pdf: End auxiliary LaTeX compilation ------------------------------------------------- Package auto-pst-pdf Warning: Creation of lmSubsets-autopp.dvi failed. This warning occured on input line 128. Package auto-pst-pdf Warning: Could not create lmSubsets-pics.pdf. Auxiliary files not deleted. This warning occured on input line 128. (/usr/share/texlive/texmf-dist/tex/latex/pst-pdf/pst-pdf.sty (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifxetex.sty) (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty) (/usr/share/texlive/texmf-dist/tex/generic/luatex85/luatex85.sty) (/usr/share/texlive/texmf-dist/tex/latex/pstricks/pstricks.sty (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/pst-xkey.tex) (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pstricks.tex (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pst-fp.tex `pst-fp' v0.06, 2020/11/20 (hv)) (/usr/share/texlive/texmf-dist/tex/latex/pgf/utilities/pgffor.sty (/usr/share/texlive/texmf-dist/tex/latex/pgf/utilities/pgfrcs.sty (/usr/share/texlive/texmf-dist/tex/generic/pgf/utilities/pgfutil-common.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/utilities/pgfutil-latex.def) (/usr/share/texlive/texmf-dist/tex/generic/pgf/utilities/pgfrcs.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/pgf.revision.tex))) (/usr/share/texlive/texmf-dist/tex/latex/pgf/utilities/pgfkeys.sty (/usr/share/texlive/texmf-dist/tex/generic/pgf/utilities/pgfkeys.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/utilities/pgfkeyslibraryfiltered .code.tex))) (/usr/share/texlive/texmf-dist/tex/latex/pgf/math/pgfmath.sty (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmath.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathutil.code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathparser.code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.basic.code .tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.trigonomet ric.code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.random.cod e.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.comparison .code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.base.code. tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.round.code .tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.misc.code. tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.integerari thmetics.code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathcalc.code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathfloat.code.tex))) (/usr/share/texlive/texmf-dist/tex/generic/pgf/utilities/pgffor.code.tex)) `PSTricks' v3.22A <2025/12/13> (tvz,hv) --- We are running latex or xelatex --- (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pstricks.con) (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pstricks-color.tex) (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pstricks-arrows.tex) (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pstricks-dots.tex) (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pst-code-grid.tex) (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pst-code-box.tex) (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pst-code-arc.tex) (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pst-code-circle_ellipse.tex ) (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pst-code-ref_rot.tex) (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pst-code-put.tex) (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pst-code-pspicture.tex) (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pstricks.con)) (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pst-fp.tex `pst-fp' v0.06, 2020/11/20 (hv))) (/usr/share/texmf/tex/latex/preview/preview.sty) (/usr/share/texlive/texmf-dist/tex/latex/environ/environ.sty (/usr/share/texlive/texmf-dist/tex/latex/trimspaces/trimspaces.sty)))) (/usr/share/texlive/texmf-dist/tex/generic/thumbpdf/thumbpdf.sty) (/usr/share/texlive/texmf-dist/tex/latex/mathtools/mathtools.sty (/usr/share/texlive/texmf-dist/tex/latex/tools/calc.sty) (/usr/share/texlive/texmf-dist/tex/latex/mathtools/mhsetup.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty))) (/usr/share/texlive/texmf-dist/tex/latex/bbm-macros/bbm.sty) (/usr/share/texlive/texmf-dist/tex/latex/pgf/frontendlayer/tikz.sty (/usr/share/texlive/texmf-dist/tex/latex/pgf/basiclayer/pgf.sty (/usr/share/texlive/texmf-dist/tex/latex/pgf/basiclayer/pgfcore.sty (/usr/share/texlive/texmf-dist/tex/latex/pgf/systemlayer/pgfsys.sty (/usr/share/texlive/texmf-dist/tex/generic/pgf/systemlayer/pgfsys.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/systemlayer/pgf.cfg) (/usr/share/texlive/texmf-dist/tex/generic/pgf/systemlayer/pgfsys-pdftex.def (/usr/share/texlive/texmf-dist/tex/generic/pgf/systemlayer/pgfsys-common-pdf.de f))) (/usr/share/texlive/texmf-dist/tex/generic/pgf/systemlayer/pgfsyssoftpath.code. tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/systemlayer/pgfsysprotocol.code. tex)) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcore.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfint.code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcorepoints.code.te x) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcorepathconstruct. code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcorepathusage.code .tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcorescopes.code.te x) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcoregraphicstate.c ode.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcoretransformation s.code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcorequick.code.tex ) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcoreobjects.code.t ex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcorepathprocessing .code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcorearrows.code.te x) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcoreshade.code.tex ) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcoreimage.code.tex ) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcoreexternal.code. tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcorelayers.code.te x) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcoretransparency.c ode.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcorepatterns.code. tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcorerdf.code.tex)) ) (/usr/share/texlive/texmf-dist/tex/generic/pgf/modules/pgfmoduleshapes.code.tex ) (/usr/share/texlive/texmf-dist/tex/generic/pgf/modules/pgfmoduleplot.code.tex ) (/usr/share/texlive/texmf-dist/tex/latex/pgf/compatibility/pgfcomp-version-0-65 .sty) (/usr/share/texlive/texmf-dist/tex/latex/pgf/compatibility/pgfcomp-version-1-18 .sty)) (/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/tikz.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/libraries/pgflibraryplothandlers .code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/modules/pgfmodulematrix.code.tex ) (/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik zlibrarytopaths.code.tex))) (/usr/share/texlive/texmf-dist/tex/latex/forest/forest.sty (/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik zlibraryshapes.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik zlibraryshapes.geometric.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/libraries/shapes/pgflibraryshape s.geometric.code.tex)) (/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik zlibraryshapes.misc.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/libraries/shapes/pgflibraryshape s.misc.code.tex)) (/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik zlibraryshapes.symbols.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/libraries/shapes/pgflibraryshape s.symbols.code.tex)) (/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik zlibraryshapes.arrows.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/libraries/shapes/pgflibraryshape s.arrows.code.tex)) (/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik zlibraryshapes.callouts.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/libraries/shapes/pgflibraryshape s.callouts.code.tex)) (/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik zlibraryshapes.multipart.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/libraries/shapes/pgflibraryshape s.multipart.code.tex))) (/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik zlibraryfit.code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik zlibrarycalc.code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/libraries/pgflibraryintersection s.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/libraries/pgflibraryfpu.code.tex )) (/usr/share/texlive/texmf-dist/tex/latex/pgfopts/pgfopts.sty) (/usr/share/texlive/texmf-dist/tex/latex/elocalloc/elocalloc.sty) (/usr/share/texlive/texmf-dist/tex/latex/l3packages/xparse/xparse.sty (/usr/share/texlive/texmf-dist/tex/latex/l3kernel/expl3.sty (/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def))) (/usr/share/texlive/texmf-dist/tex/latex/inlinedef/inlinedef.sty)) (/usr/share/texlive/texmf-dist/tex/latex/tools/array.sty) (/usr/share/texlive/texmf-dist/tex/latex/booktabs/booktabs.sty) (/usr/share/texlive/texmf-dist/tex/latex/caption/subcaption.sty (/usr/share/texlive/texmf-dist/tex/latex/caption/caption.sty (/usr/share/texlive/texmf-dist/tex/latex/caption/caption3.sty))) (/usr/share/texlive/texmf-dist/tex/latex/threeparttable/threeparttable.sty) (/home/hornik/tmp/R.check/r-release-gcc/Work/build/share/texmf/tex/latex/Sweave .sty (/usr/share/texlive/texmf-dist/tex/latex/base/ifthen.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/fontenc.sty (/usr/share/texmf/tex/latex/lm/t1lmr.fd)) Environment Schunk is already defined, stay with former definition) No file lmSubsets.aux. (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texmf/tex/latex/lm/t1lmss.fd) (/usr/share/texmf/tex/latex/lm/ot1lmr.fd) (/usr/share/texmf/tex/latex/lm/omllmm.fd) (/usr/share/texmf/tex/latex/lm/omslmsy.fd) (/usr/share/texmf/tex/latex/lm/omxlmex.fd) Package natbib Warning: Citation `hofmann:20' on page 1 undefined on input line 122. (/usr/share/texmf/tex/latex/lm/t1lmtt.fd) Preview: Fontsize 10.95pt Preview: PDFoutput 1 Package natbib Warning: Citation `clarke:81' on page 1 undefined on input line 135. Package natbib Warning: Citation `hastie:01' on page 1 undefined on input line 135. Package natbib Warning: Citation `miller:02' on page 1 undefined on input line 139. (/usr/share/texlive/texmf-dist/tex/latex/bbm-macros/ubbm.fd) Package natbib Warning: Citation `golub:96' on page 1 undefined on input line 1 67. [1 Non-PDF special ignored! <special> ps: /pssetRGBcolor /setrgbcolor load def /pssetCMYKcolor /setcmyk... Non-PDF special ignored! <special> ps:tx@Dict begin gsave STV CP T /ps@rot 0 def grestore end Non-PDF special ignored! <special> ps:tx@Dict begin gsave STV CP T /ps@refangle 0. def grestore e... {/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}{/usr/share/texmf/fonts/enc/ dvips/lm/lm-ec.enc}{/usr/share/texmf/fonts/enc/dvips/lm/lm-mathsy.enc}{/usr/sha re/texmf/fonts/enc/dvips/lm/lm-mathit.enc}{/usr/share/texmf/fonts/enc/dvips/lm/ lm-rm.enc}] Package natbib Warning: Citation `miller:02' on page 2 undefined on input line 205. LaTeX Warning: Reference `eq:best_subset' on page 2 undefined on input line 206 . LaTeX Warning: Reference `eq:all_subsets' on page 2 undefined on input line 224 . LaTeX Warning: Reference `eq:best_subset' on page 2 undefined on input line 225 . LaTeX Warning: Reference `eq:all_subsets' on page 2 undefined on input line 236 . LaTeX Warning: Reference `eq:best_subset' on page 2 undefined on input line 245 . Package natbib Warning: Citation `goldberg:89' on page 2 undefined on input lin e 258. Package natbib Warning: Citation `otten:89' on page 2 undefined on input line 2 58. Package natbib Warning: Citation `leaps' on page 2 undefined on input line 263. Package natbib Warning: Citation `miller:02' on page 2 undefined on input line 265. Package natbib Warning: Citation `bestglm' on page 2 undefined on input line 26 6. Package natbib Warning: Citation `BeSS' on page 2 undefined on input line 269. Package natbib Warning: Citation `subselect' on page 2 undefined on input line 269. Package natbib Warning: Citation `glmulti' on page 2 undefined on input line 27 2. Package natbib Warning: Citation `wolters:15' on page 2 undefined on input line 275. Package natbib Warning: Citation `friedman:10' on page 2 undefined on input lin e 279. Overfull \hbox (5.47499pt too wide) has occurred while \output is active \T1/lmr/m/n/10.95 2 [] [2] Package natbib Warning: Citation `lmSubsets' on page 3 undefined on input line 281. LaTeX Warning: Reference `eq:best_subset' on page 3 undefined on input line 283 . LaTeX Warning: Reference `eq:all_subsets' on page 3 undefined on input line 284 . Package natbib Warning: Citation `gatu:06' on page 3 undefined on input line 28 5. Package natbib Warning: Citation `hofmann:07' on page 3 undefined on input line 285. Package natbib Warning: Citation `hofmann:10' on page 3 undefined on input line 288. Package natbib Warning: Citation `R' on page 3 undefined on input line 294. LaTeX Warning: Reference `sec:comput' on page 3 undefined on input line 297. LaTeX Warning: Reference `sec:R' on page 3 undefined on input line 299. LaTeX Warning: Reference `sec:usecase' on page 3 undefined on input line 300. LaTeX Warning: Reference `sec:benchmarks' on page 3 undefined on input line 301 . LaTeX Warning: Reference `eq:olm' on page 3 undefined on input line 311. LaTeX Warning: Reference `eq:all_subsets' on page 3 undefined on input line 315 . Package natbib Warning: Citation `gatu:03' on page 3 undefined on input line 31 7. Package natbib Warning: Citation `gatu:07' on page 3 undefined on input line 31 7. Package natbib Warning: Citation `smith:89' on page 3 undefined on input line 3 17. Package natbib Warning: Citation `golub:96' on page 3 undefined on input line 3 35. Package natbib Warning: Citation `kontoghiorghes:00' on page 3 undefined on inp ut line 335. Package natbib Warning: Citation `smith:89' on page 3 undefined on input line 3 35. Package natbib Warning: Citation `gatu:06' on page 3 undefined on input line 33 9. Package natbib Warning: Citation `hofmann:07' on page 3 undefined on input line 339. LaTeX Warning: Reference `fig:dca_tree' on page 3 undefined on input line 339. Overfull \hbox (5.47499pt too wide) has occurred while \output is active [] \T1/lmr/m/n/10.95 3 [3] Package amsmath Warning: Foreign command \atop; (amsmath) \frac or \genfrac should be used instead (amsmath) on input line 364. Package natbib Warning: Citation `gatu:06' on page 4 undefined on input line 38 7. LaTeX Warning: Reference `eq:all_subsets' on page 4 undefined on input line 389 . Package natbib Warning: Citation `hofmann:07' on page 4 undefined on input line 393. LaTeX Warning: Reference `eq:all_subsets' on page 4 undefined on input line 394 . Package natbib Warning: Citation `gatu:06' on page 4 undefined on input line 41 3. Package natbib Warning: Citation `hofmann:07' on page 4 undefined on input line 418. Overfull \hbox (5.47499pt too wide) has occurred while \output is active \T1/lmr/m/n/10.95 4 [] [4] Package natbib Warning: Citation `gatu:06' on page 5 undefined on input line 44 2. Package natbib Warning: Citation `hofmann:07' on page 5 undefined on input line 442. LaTeX Warning: Reference `eq:best_subset' on page 5 undefined on input line 450 . LaTeX Warning: Reference `eq:f:monotonicity' on page 5 undefined on input line 453. LaTeX Warning: Reference `eq:all_subsets' on page 5 undefined on input line 481 . LaTeX Warning: Reference `eq:best_subset' on page 5 undefined on input line 482 . LaTeX Warning: Reference `tab:structure' on page 5 undefined on input line 491. Package natbib Warning: Citation `chambers:92' on page 5 undefined on input lin e 525. Overfull \hbox (5.47499pt too wide) has occurred while \output is active [] \T1/lmr/m/n/10.95 5 [5] Package natbib Warning: Citation `miller:02' on page 6 undefined on input line 538. Overfull \hbox (5.47499pt too wide) has occurred while \output is active \T1/lmr/m/n/10.95 6 [] [6] LaTeX Warning: Reference `eq:aic' on page 7 undefined on input line 595. Package natbib Warning: Citation `akaike:74' on page 7 undefined on input line 601. Package natbib Warning: Citation `schwarz:78' on page 7 undefined on input line 603. LaTeX Warning: Reference `tab:params' on page 7 undefined on input line 657. Overfull \hbox (5.47499pt too wide) has occurred while \output is active [] \T1/lmr/m/n/10.95 7 [7] LaTeX Warning: Reference `sec:benchmarks' on page 8 undefined on input line 694 . LaTeX Warning: Reference `eq:all_subsets:subrange' on page 8 undefined on input line 699. LaTeX Warning: Reference `eq:abba' on page 8 undefined on input line 708. LaTeX Warning: Reference `sec:comput' on page 8 undefined on input line 729. Overfull \hbox (5.47499pt too wide) has occurred while \output is active \T1/lmr/m/n/10.95 8 [] [8] LaTeX Warning: Reference `tab:components' on page 9 undefined on input line 746 . LaTeX Warning: Reference `tab:methods' on page 9 undefined on input line 772. Package natbib Warning: Citation `bauer:15' on page 9 undefined on input line 8 37. Package natbib Warning: Citation `glahn:72' on page 9 undefined on input line 8 40. Package natbib Warning: Citation `wilks:11' on page 9 undefined on input line 8 43. Overfull \hbox (5.47499pt too wide) has occurred while \output is active [] \T1/lmr/m/n/10.95 9 [9] Package natbib Warning: Citation `hamill:13' on page 10 undefined on input line 853. Overfull \hbox (10.94998pt too wide) has occurred while \output is active \T1/lmr/m/n/10.95 10 [] [10] LaTeX Warning: Reference `tab:summary' on page 11 undefined on input line 885. LaTeX Warning: Reference `fig:image:mos1' on page 11 undefined on input line 94 7. LaTeX Warning: Reference `fig:plot:mos1' on page 11 undefined on input line 947 . LaTeX Warning: Reference `tab:summary' on page 11 undefined on input line 950. LaTeX Warning: Reference `fig:image:mos2' on page 11 undefined on input line 99 6. LaTeX Warning: Reference `fig:plot:mos2' on page 11 undefined on input line 997 . LaTeX Warning: Reference `tab:summary' on page 11 undefined on input line 1001. Overfull \hbox (10.94998pt too wide) has occurred while \output is active [] \T1/lmr/m/n/10.95 11 [11] LaTeX Warning: Reference `fig:image:mos2' on page 12 undefined on input line 10 13. Underfull \vbox (badness 10000) has occurred while \output is active Overfull \hbox (10.94998pt too wide) has occurred while \output is active \T1/lmr/m/n/10.95 12 [] [12 <./lmSubsets-mos1-best-image.pdf> <./lmSubsets-mos2-all-image.pdf>] Package natbib Warning: Citation `messner:16' on page 13 undefined on input lin e 1029. Package natbib Warning: Citation `messner:17' on page 13 undefined on input lin e 1029. Overfull \hbox (10.94998pt too wide) has occurred while \output is active [] \T1/lmr/m/n/10.95 13 [13 <./lmSubsets-mos1-best-plot.pdf> <./lmSubsets-mos2-all-plot.pdf>] Package natbib Warning: Citation `hofmann:07' on page 14 undefined on input lin e 1080. LaTeX Warning: Reference `tab:bm1' on page 14 undefined on input line 1081. LaTeX Warning: Reference `tab:bm2' on page 14 undefined on input line 1087. LaTeX Warning: Reference `sec:intro' on page 14 undefined on input line 1200. LaTeX Warning: Reference `tab:bm3' on page 14 undefined on input line 1213. LaTeX Warning: Reference `eq:bba+' on page 14 undefined on input line 1270. LaTeX Warning: Reference `tab:bm4' on page 14 undefined on input line 1280. LaTeX Warning: Reference `tab:bm5' on page 14 undefined on input line 1283. Overfull \hbox (10.94998pt too wide) has occurred while \output is active \T1/lmr/m/n/10.95 14 [] [14] Package natbib Warning: Citation `tibshirani:96' on page 15 undefined on input line 1338. Overfull \hbox (10.94998pt too wide) has occurred while \output is active [] \T1/lmr/m/n/10.95 15 [15] LaTeX Warning: Reference `tab:bmlasso' on page 16 undefined on input line 1354. Underfull \vbox (badness 2980) has occurred while \output is active Overfull \hbox (10.94998pt too wide) has occurred while \output is active \T1/lmr/m/n/10.95 16 [] [16] Overfull \hbox (10.94998pt too wide) has occurred while \output is active [] \T1/lmr/m/n/10.95 17 [17] No file lmSubsets.bbl. Package natbib Warning: There were undefined citations. Overfull \hbox (10.94998pt too wide) has occurred while \output is active \T1/lmr/m/n/10.95 18 [] [18] (./lmSubsets.aux) LaTeX Warning: There were undefined references. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. Package rerunfilecheck Warning: File `lmSubsets.out' has changed. (rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. ) (see the transcript file for additional information) pdfTeX warning (dest): name{Hfootnote.1} has been referenced but does not exist , replaced by a fixed one </home/hornik/.texlive2026/texmf-var/fonts/pk/ljfour/public/bbm/bbm10.657pk></ usr/share/texmf/fonts/type1/public/lm/lmb10.pfb></usr/share/texmf/fonts/type1/p ublic/lm/lmbo10.pfb></usr/share/texmf/fonts/type1/public/lm/lmbx10.pfb></usr/sh are/texmf/fonts/type1/public/lm/lmbx12.pfb></usr/share/texmf/fonts/type1/public /lm/lmmi10.pfb></usr/share/texmf/fonts/type1/public/lm/lmmi8.pfb></usr/share/te xmf/fonts/type1/public/lm/lmr10.pfb></usr/share/texmf/fonts/type1/public/lm/lmr 6.pfb></usr/share/texmf/fonts/type1/public/lm/lmr8.pfb></usr/share/texmf/fonts/ type1/public/lm/lmr9.pfb></usr/share/texmf/fonts/type1/public/lm/lmri10.pfb></u sr/share/texmf/fonts/type1/public/lm/lmri8.pfb></usr/share/texmf/fonts/type1/pu blic/lm/lmro10.pfb></usr/share/texmf/fonts/type1/public/lm/lmss10.pfb></usr/sha re/texmf/fonts/type1/public/lm/lmss8.pfb></usr/share/texmf/fonts/type1/public/l m/lmssbx10.pfb></usr/share/texmf/fonts/type1/public/lm/lmsso10.pfb></usr/share/ texmf/fonts/type1/public/lm/lmsy10.pfb></usr/share/texmf/fonts/type1/public/lm/ lmsy6.pfb></usr/share/texmf/fonts/type1/public/lm/lmsy8.pfb></usr/share/texmf/f onts/type1/public/lm/lmtt10.pfb></usr/share/texmf/fonts/type1/public/lm/lmtt8.p fb></usr/share/texmf/fonts/type1/public/lm/lmtt9.pfb></usr/share/texmf/fonts/ty pe1/public/lm/lmtto10.pfb> Output written on lmSubsets.pdf (18 pages, 564343 bytes). Transcript written on lmSubsets.log. bibtex lmSubsets.aux This is BibTeX, Version 0.99e (TeX Live 2026/Debian) The top-level auxiliary file: lmSubsets.aux The style file: jss.bst Database file #1: lmSubsets.bib pdflatex --shell-escape lmSubsets This is pdfTeX, Version 3.141592653-2.6-1.40.29 (TeX Live 2026/Debian) (preloaded format=pdflatex) \write18 enabled. entering extended mode (./lmSubsets.tex LaTeX2e <2025-11-01> L3 programming layer <2026-05-15> (/home/hornik/tmp/R.check/r-release-gcc/Work/build/share/texmf/tex/latex/jss.cl s Document Class: jss 2023/03/05 3.4 jss class by Achim Zeileis (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2025/01/22 v1.4n Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size11.clo)) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) (/usr/share/texlive/texmf-dist/tex/latex/xcolor/xcolor.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics/mathcolor.ltx)) (/usr/share/texlive/texmf-dist/tex/latex/fancyvrb/fancyvrb.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/fontenc.sty) (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty (/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty)) (/usr/share/texmf/tex/latex/lm/lmodern.sty) (/usr/share/texlive/texmf-dist/tex/latex/natbib/natbib.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty) (/usr/share/texlive/texmf-dist/tex/latex/kvsetkeys/kvsetkeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty (/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty (/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty))) (/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty) (/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty (/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty))) (/usr/share/texlive/texmf-dist/tex/latex/etoolbox/etoolbox.sty) (/usr/share/texlive/texmf-dist/tex/generic/stringenc/stringenc.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty (/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty))) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty (/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty)))) (/usr/share/texlive/texmf-dist/tex/latex/auto-pst-pdf/auto-pst-pdf.sty (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty) (/usr/share/texlive/texmf-dist/tex/latex/xkeyval/xkeyval.sty (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/xkeyval.tex (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/xkvutils.tex))) (/usr/share/texlive/texmf-dist/tex/latex/ifplatform/ifplatform.sty (/usr/share/texlive/texmf-dist/tex/latex/tools/shellesc.sty) (/usr/share/texlive/texmf-dist/tex/generic/catchfile/catchfile.sty (/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty)) (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifluatex.sty) (./lmSubsets.w18 )) ------------------------------------------------- auto-pst-pdf: Auxiliary LaTeX compilation ------------------------------------------------- This is pdfTeX, Version 3.141592653-2.6-1.40.29 (TeX Live 2026/Debian) (preloaded format=latex) entering extended mode ------------------------------------------------- auto-pst-pdf: End auxiliary LaTeX compilation ------------------------------------------------- Package auto-pst-pdf Warning: Creation of lmSubsets-autopp.dvi failed. This warning occured on input line 128. Package auto-pst-pdf Warning: Could not create lmSubsets-pics.pdf. Auxiliary files not deleted. This warning occured on input line 128. (/usr/share/texlive/texmf-dist/tex/latex/pst-pdf/pst-pdf.sty (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifxetex.sty) (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty) (/usr/share/texlive/texmf-dist/tex/generic/luatex85/luatex85.sty) (/usr/share/texlive/texmf-dist/tex/latex/pstricks/pstricks.sty (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/pst-xkey.tex) (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pstricks.tex (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pst-fp.tex `pst-fp' v0.06, 2020/11/20 (hv)) (/usr/share/texlive/texmf-dist/tex/latex/pgf/utilities/pgffor.sty (/usr/share/texlive/texmf-dist/tex/latex/pgf/utilities/pgfrcs.sty (/usr/share/texlive/texmf-dist/tex/generic/pgf/utilities/pgfutil-common.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/utilities/pgfutil-latex.def) (/usr/share/texlive/texmf-dist/tex/generic/pgf/utilities/pgfrcs.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/pgf.revision.tex))) (/usr/share/texlive/texmf-dist/tex/latex/pgf/utilities/pgfkeys.sty (/usr/share/texlive/texmf-dist/tex/generic/pgf/utilities/pgfkeys.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/utilities/pgfkeyslibraryfiltered .code.tex))) (/usr/share/texlive/texmf-dist/tex/latex/pgf/math/pgfmath.sty (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmath.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathutil.code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathparser.code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.basic.code .tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.trigonomet ric.code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.random.cod e.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.comparison .code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.base.code. tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.round.code .tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.misc.code. tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.integerari thmetics.code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathcalc.code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathfloat.code.tex))) (/usr/share/texlive/texmf-dist/tex/generic/pgf/utilities/pgffor.code.tex)) `PSTricks' v3.22A <2025/12/13> (tvz,hv) --- We are running latex or xelatex --- (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pstricks.con) (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pstricks-color.tex) (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pstricks-arrows.tex) (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pstricks-dots.tex) (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pst-code-grid.tex) (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pst-code-box.tex) (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pst-code-arc.tex) (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pst-code-circle_ellipse.tex ) (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pst-code-ref_rot.tex) (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pst-code-put.tex) (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pst-code-pspicture.tex) (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pstricks.con)) (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pst-fp.tex `pst-fp' v0.06, 2020/11/20 (hv))) (/usr/share/texmf/tex/latex/preview/preview.sty) (/usr/share/texlive/texmf-dist/tex/latex/environ/environ.sty (/usr/share/texlive/texmf-dist/tex/latex/trimspaces/trimspaces.sty)))) (/usr/share/texlive/texmf-dist/tex/generic/thumbpdf/thumbpdf.sty) (/usr/share/texlive/texmf-dist/tex/latex/mathtools/mathtools.sty (/usr/share/texlive/texmf-dist/tex/latex/tools/calc.sty) (/usr/share/texlive/texmf-dist/tex/latex/mathtools/mhsetup.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty))) (/usr/share/texlive/texmf-dist/tex/latex/bbm-macros/bbm.sty) (/usr/share/texlive/texmf-dist/tex/latex/pgf/frontendlayer/tikz.sty (/usr/share/texlive/texmf-dist/tex/latex/pgf/basiclayer/pgf.sty (/usr/share/texlive/texmf-dist/tex/latex/pgf/basiclayer/pgfcore.sty (/usr/share/texlive/texmf-dist/tex/latex/pgf/systemlayer/pgfsys.sty (/usr/share/texlive/texmf-dist/tex/generic/pgf/systemlayer/pgfsys.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/systemlayer/pgf.cfg) (/usr/share/texlive/texmf-dist/tex/generic/pgf/systemlayer/pgfsys-pdftex.def (/usr/share/texlive/texmf-dist/tex/generic/pgf/systemlayer/pgfsys-common-pdf.de f))) (/usr/share/texlive/texmf-dist/tex/generic/pgf/systemlayer/pgfsyssoftpath.code. tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/systemlayer/pgfsysprotocol.code. tex)) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcore.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfint.code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcorepoints.code.te x) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcorepathconstruct. code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcorepathusage.code .tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcorescopes.code.te x) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcoregraphicstate.c ode.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcoretransformation s.code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcorequick.code.tex ) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcoreobjects.code.t ex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcorepathprocessing .code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcorearrows.code.te x) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcoreshade.code.tex ) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcoreimage.code.tex ) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcoreexternal.code. tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcorelayers.code.te x) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcoretransparency.c ode.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcorepatterns.code. tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcorerdf.code.tex)) ) (/usr/share/texlive/texmf-dist/tex/generic/pgf/modules/pgfmoduleshapes.code.tex ) (/usr/share/texlive/texmf-dist/tex/generic/pgf/modules/pgfmoduleplot.code.tex ) (/usr/share/texlive/texmf-dist/tex/latex/pgf/compatibility/pgfcomp-version-0-65 .sty) (/usr/share/texlive/texmf-dist/tex/latex/pgf/compatibility/pgfcomp-version-1-18 .sty)) (/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/tikz.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/libraries/pgflibraryplothandlers .code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/modules/pgfmodulematrix.code.tex ) (/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik zlibrarytopaths.code.tex))) (/usr/share/texlive/texmf-dist/tex/latex/forest/forest.sty (/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik zlibraryshapes.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik zlibraryshapes.geometric.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/libraries/shapes/pgflibraryshape s.geometric.code.tex)) (/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik zlibraryshapes.misc.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/libraries/shapes/pgflibraryshape s.misc.code.tex)) (/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik zlibraryshapes.symbols.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/libraries/shapes/pgflibraryshape s.symbols.code.tex)) (/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik zlibraryshapes.arrows.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/libraries/shapes/pgflibraryshape s.arrows.code.tex)) (/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik zlibraryshapes.callouts.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/libraries/shapes/pgflibraryshape s.callouts.code.tex)) (/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik zlibraryshapes.multipart.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/libraries/shapes/pgflibraryshape s.multipart.code.tex))) (/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik zlibraryfit.code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik zlibrarycalc.code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/libraries/pgflibraryintersection s.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/libraries/pgflibraryfpu.code.tex )) (/usr/share/texlive/texmf-dist/tex/latex/pgfopts/pgfopts.sty) (/usr/share/texlive/texmf-dist/tex/latex/elocalloc/elocalloc.sty) (/usr/share/texlive/texmf-dist/tex/latex/l3packages/xparse/xparse.sty (/usr/share/texlive/texmf-dist/tex/latex/l3kernel/expl3.sty (/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def))) (/usr/share/texlive/texmf-dist/tex/latex/inlinedef/inlinedef.sty)) (/usr/share/texlive/texmf-dist/tex/latex/tools/array.sty) (/usr/share/texlive/texmf-dist/tex/latex/booktabs/booktabs.sty) (/usr/share/texlive/texmf-dist/tex/latex/caption/subcaption.sty (/usr/share/texlive/texmf-dist/tex/latex/caption/caption.sty (/usr/share/texlive/texmf-dist/tex/latex/caption/caption3.sty))) (/usr/share/texlive/texmf-dist/tex/latex/threeparttable/threeparttable.sty) (/home/hornik/tmp/R.check/r-release-gcc/Work/build/share/texmf/tex/latex/Sweave .sty (/usr/share/texlive/texmf-dist/tex/latex/base/ifthen.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/fontenc.sty (/usr/share/texmf/tex/latex/lm/t1lmr.fd)) Environment Schunk is already defined, stay with former definition) (./lmSubsets.aux) (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (./lmSubsets.out) (./lmSubsets.out) (/usr/share/texmf/tex/latex/lm/t1lmss.fd) (/usr/share/texmf/tex/latex/lm/ot1lmr.fd) (/usr/share/texmf/tex/latex/lm/omllmm.fd) (/usr/share/texmf/tex/latex/lm/omslmsy.fd) (/usr/share/texmf/tex/latex/lm/omxlmex.fd) Package natbib Warning: Citation `hofmann:20' on page 1 undefined on input line 122. (/usr/share/texmf/tex/latex/lm/t1lmtt.fd) Preview: Fontsize 10.95pt Preview: PDFoutput 1 Package natbib Warning: Citation `clarke:81' on page 1 undefined on input line 135. Package natbib Warning: Citation `hastie:01' on page 1 undefined on input line 135. Package natbib Warning: Citation `miller:02' on page 1 undefined on input line 139. (/usr/share/texlive/texmf-dist/tex/latex/bbm-macros/ubbm.fd) Package natbib Warning: Citation `golub:96' on page 1 undefined on input line 1 67. [1 Non-PDF special ignored! <special> ps: /pssetRGBcolor /setrgbcolor load def /pssetCMYKcolor /setcmyk... Non-PDF special ignored! <special> ps:tx@Dict begin gsave STV CP T /ps@rot 0 def grestore end Non-PDF special ignored! <special> ps:tx@Dict begin gsave STV CP T /ps@refangle 0. def grestore e... {/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}{/usr/share/texmf/fonts/enc/ dvips/lm/lm-ec.enc}{/usr/share/texmf/fonts/enc/dvips/lm/lm-mathsy.enc}{/usr/sha re/texmf/fonts/enc/dvips/lm/lm-mathit.enc}{/usr/share/texmf/fonts/enc/dvips/lm/ lm-rm.enc}] Package natbib Warning: Citation `miller:02' on page 2 undefined on input line 205. Package natbib Warning: Citation `goldberg:89' on page 2 undefined on input lin e 258. Package natbib Warning: Citation `otten:89' on page 2 undefined on input line 2 58. Package natbib Warning: Citation `leaps' on page 2 undefined on input line 263. Package natbib Warning: Citation `miller:02' on page 2 undefined on input line 265. Package natbib Warning: Citation `bestglm' on page 2 undefined on input line 26 6. Package natbib Warning: Citation `BeSS' on page 2 undefined on input line 269. Package natbib Warning: Citation `subselect' on page 2 undefined on input line 269. Package natbib Warning: Citation `glmulti' on page 2 undefined on input line 27 2. Package natbib Warning: Citation `wolters:15' on page 2 undefined on input line 275. Package natbib Warning: Citation `friedman:10' on page 2 undefined on input lin e 279. Overfull \hbox (5.47499pt too wide) has occurred while \output is active \T1/lmr/m/n/10.95 2 [] [2] Package natbib Warning: Citation `lmSubsets' on page 3 undefined on input line 281. Package natbib Warning: Citation `gatu:06' on page 3 undefined on input line 28 5. Package natbib Warning: Citation `hofmann:07' on page 3 undefined on input line 285. Package natbib Warning: Citation `hofmann:10' on page 3 undefined on input line 288. Package natbib Warning: Citation `R' on page 3 undefined on input line 294. Package natbib Warning: Citation `gatu:03' on page 3 undefined on input line 31 7. Package natbib Warning: Citation `gatu:07' on page 3 undefined on input line 31 7. Package natbib Warning: Citation `smith:89' on page 3 undefined on input line 3 17. Package natbib Warning: Citation `golub:96' on page 3 undefined on input line 3 35. Package natbib Warning: Citation `kontoghiorghes:00' on page 3 undefined on inp ut line 335. Package natbib Warning: Citation `smith:89' on page 3 undefined on input line 3 35. Package natbib Warning: Citation `gatu:06' on page 3 undefined on input line 33 9. Package natbib Warning: Citation `hofmann:07' on page 3 undefined on input line 339. Overfull \hbox (5.47499pt too wide) has occurred while \output is active [] \T1/lmr/m/n/10.95 3 [3] Package amsmath Warning: Foreign command \atop; (amsmath) \frac or \genfrac should be used instead (amsmath) on input line 364. Package natbib Warning: Citation `gatu:06' on page 4 undefined on input line 38 7. Package natbib Warning: Citation `hofmann:07' on page 4 undefined on input line 393. Package natbib Warning: Citation `gatu:06' on page 4 undefined on input line 41 3. Package natbib Warning: Citation `hofmann:07' on page 4 undefined on input line 418. Overfull \hbox (5.47499pt too wide) has occurred while \output is active \T1/lmr/m/n/10.95 4 [] [4] Package natbib Warning: Citation `gatu:06' on page 5 undefined on input line 44 2. Package natbib Warning: Citation `hofmann:07' on page 5 undefined on input line 442. Package natbib Warning: Citation `chambers:92' on page 5 undefined on input lin e 525. Overfull \hbox (5.47499pt too wide) has occurred while \output is active [] \T1/lmr/m/n/10.95 5 [5] Package natbib Warning: Citation `miller:02' on page 6 undefined on input line 538. Overfull \hbox (5.47499pt too wide) has occurred while \output is active \T1/lmr/m/n/10.95 6 [] [6] Package natbib Warning: Citation `akaike:74' on page 7 undefined on input line 601. Package natbib Warning: Citation `schwarz:78' on page 7 undefined on input line 603. Overfull \hbox (5.47499pt too wide) has occurred while \output is active [] \T1/lmr/m/n/10.95 7 [7] Overfull \hbox (5.47499pt too wide) has occurred while \output is active \T1/lmr/m/n/10.95 8 [] [8] Package natbib Warning: Citation `bauer:15' on page 9 undefined on input line 8 37. Package natbib Warning: Citation `glahn:72' on page 9 undefined on input line 8 40. Package natbib Warning: Citation `wilks:11' on page 9 undefined on input line 8 43. Overfull \hbox (5.47499pt too wide) has occurred while \output is active [] \T1/lmr/m/n/10.95 9 [9] Package natbib Warning: Citation `hamill:13' on page 10 undefined on input line 853. Overfull \hbox (10.94998pt too wide) has occurred while \output is active \T1/lmr/m/n/10.95 10 [] [10] Overfull \hbox (10.94998pt too wide) has occurred while \output is active [] \T1/lmr/m/n/10.95 11 [11] Underfull \vbox (badness 10000) has occurred while \output is active Overfull \hbox (10.94998pt too wide) has occurred while \output is active \T1/lmr/m/n/10.95 12 [] [12 <./lmSubsets-mos1-best-image.pdf> <./lmSubsets-mos2-all-image.pdf>] Package natbib Warning: Citation `messner:16' on page 13 undefined on input lin e 1029. Package natbib Warning: Citation `messner:17' on page 13 undefined on input lin e 1029. Overfull \hbox (10.94998pt too wide) has occurred while \output is active [] \T1/lmr/m/n/10.95 13 [13 <./lmSubsets-mos1-best-plot.pdf> <./lmSubsets-mos2-all-plot.pdf>] Package natbib Warning: Citation `hofmann:07' on page 14 undefined on input lin e 1080. Overfull \hbox (10.94998pt too wide) has occurred while \output is active \T1/lmr/m/n/10.95 14 [] [14] Package natbib Warning: Citation `tibshirani:96' on page 15 undefined on input line 1338. Overfull \hbox (10.94998pt too wide) has occurred while \output is active [] \T1/lmr/m/n/10.95 15 [15] Underfull \vbox (badness 2980) has occurred while \output is active Overfull \hbox (10.94998pt too wide) has occurred while \output is active \T1/lmr/m/n/10.95 16 [] [16] Overfull \hbox (10.94998pt too wide) has occurred while \output is active [] \T1/lmr/m/n/10.95 17 [17] (./lmSubsets.bbl LaTeX Font Warning: Font shape `T1/lmr/b/it' in size <10.95> not available (Font) Font shape `T1/lmr/b/sl' tried instead on input line 28. Overfull \hbox (10.94998pt too wide) has occurred while \output is active \T1/lmr/m/n/10.95 18 [] [18] Overfull \hbox (10.94998pt too wide) has occurred while \output is active [] \T1/lmr/m/n/10.95 19 [19]) Package natbib Warning: There were undefined citations. Overfull \hbox (10.94998pt too wide) has occurred while \output is active \T1/lmr/m/n/10.95 20 [] [20] Overfull \hbox (10.94998pt too wide) has occurred while \output is active [] \T1/lmr/m/n/10.95 21 [21] (./lmSubsets.aux Package natbib Warning: Citation(s) may have changed. (natbib) Rerun to get citations correct. ) ) (see the transcript file for additional information) pdfTeX warning (dest): name{Hfootnote.1} has been referenced but does not exist , replaced by a fixed one </home/hornik/.texlive2026/texmf-var/fonts/pk/ljfour/public/bbm/bbm10.657pk></ usr/share/texmf/fonts/type1/public/lm/lmb10.pfb></usr/share/texmf/fonts/type1/p ublic/lm/lmbo10.pfb></usr/share/texmf/fonts/type1/public/lm/lmbx10.pfb></usr/sh are/texmf/fonts/type1/public/lm/lmbx12.pfb></usr/share/texmf/fonts/type1/public /lm/lmmi10.pfb></usr/share/texmf/fonts/type1/public/lm/lmmi8.pfb></usr/share/te xmf/fonts/type1/public/lm/lmr10.pfb></usr/share/texmf/fonts/type1/public/lm/lmr 6.pfb></usr/share/texmf/fonts/type1/public/lm/lmr8.pfb></usr/share/texmf/fonts/ type1/public/lm/lmr9.pfb></usr/share/texmf/fonts/type1/public/lm/lmri10.pfb></u sr/share/texmf/fonts/type1/public/lm/lmri8.pfb></usr/share/texmf/fonts/type1/pu blic/lm/lmro10.pfb></usr/share/texmf/fonts/type1/public/lm/lmss10.pfb></usr/sha re/texmf/fonts/type1/public/lm/lmss8.pfb></usr/share/texmf/fonts/type1/public/l m/lmssbx10.pfb></usr/share/texmf/fonts/type1/public/lm/lmsso10.pfb></usr/share/ texmf/fonts/type1/public/lm/lmsy10.pfb></usr/share/texmf/fonts/type1/public/lm/ lmsy6.pfb></usr/share/texmf/fonts/type1/public/lm/lmsy8.pfb></usr/share/texmf/f onts/type1/public/lm/lmtt10.pfb></usr/share/texmf/fonts/type1/public/lm/lmtt8.p fb></usr/share/texmf/fonts/type1/public/lm/lmtt9.pfb></usr/share/texmf/fonts/ty pe1/public/lm/lmtto10.pfb> Output written on lmSubsets.pdf (21 pages, 587571 bytes). Transcript written on lmSubsets.log. pdflatex --shell-escape lmSubsets This is pdfTeX, Version 3.141592653-2.6-1.40.29 (TeX Live 2026/Debian) (preloaded format=pdflatex) \write18 enabled. entering extended mode (./lmSubsets.tex LaTeX2e <2025-11-01> L3 programming layer <2026-05-15> (/home/hornik/tmp/R.check/r-release-gcc/Work/build/share/texmf/tex/latex/jss.cl s Document Class: jss 2023/03/05 3.4 jss class by Achim Zeileis (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2025/01/22 v1.4n Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size11.clo)) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) (/usr/share/texlive/texmf-dist/tex/latex/xcolor/xcolor.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics/mathcolor.ltx)) (/usr/share/texlive/texmf-dist/tex/latex/fancyvrb/fancyvrb.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/fontenc.sty) (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty (/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty)) (/usr/share/texmf/tex/latex/lm/lmodern.sty) (/usr/share/texlive/texmf-dist/tex/latex/natbib/natbib.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty) (/usr/share/texlive/texmf-dist/tex/latex/kvsetkeys/kvsetkeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty (/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty (/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty))) (/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty) (/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty (/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty))) (/usr/share/texlive/texmf-dist/tex/latex/etoolbox/etoolbox.sty) (/usr/share/texlive/texmf-dist/tex/generic/stringenc/stringenc.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty (/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty))) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty (/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty)))) (/usr/share/texlive/texmf-dist/tex/latex/auto-pst-pdf/auto-pst-pdf.sty (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty) (/usr/share/texlive/texmf-dist/tex/latex/xkeyval/xkeyval.sty (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/xkeyval.tex (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/xkvutils.tex))) (/usr/share/texlive/texmf-dist/tex/latex/ifplatform/ifplatform.sty (/usr/share/texlive/texmf-dist/tex/latex/tools/shellesc.sty) (/usr/share/texlive/texmf-dist/tex/generic/catchfile/catchfile.sty (/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty)) (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifluatex.sty) (./lmSubsets.w18 )) ------------------------------------------------- auto-pst-pdf: Auxiliary LaTeX compilation ------------------------------------------------- This is pdfTeX, Version 3.141592653-2.6-1.40.29 (TeX Live 2026/Debian) (preloaded format=latex) entering extended mode ------------------------------------------------- auto-pst-pdf: End auxiliary LaTeX compilation ------------------------------------------------- Package auto-pst-pdf Warning: Creation of lmSubsets-autopp.dvi failed. This warning occured on input line 128. Package auto-pst-pdf Warning: Could not create lmSubsets-pics.pdf. Auxiliary files not deleted. This warning occured on input line 128. (/usr/share/texlive/texmf-dist/tex/latex/pst-pdf/pst-pdf.sty (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifxetex.sty) (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty) (/usr/share/texlive/texmf-dist/tex/generic/luatex85/luatex85.sty) (/usr/share/texlive/texmf-dist/tex/latex/pstricks/pstricks.sty (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/pst-xkey.tex) (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pstricks.tex (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pst-fp.tex `pst-fp' v0.06, 2020/11/20 (hv)) (/usr/share/texlive/texmf-dist/tex/latex/pgf/utilities/pgffor.sty (/usr/share/texlive/texmf-dist/tex/latex/pgf/utilities/pgfrcs.sty (/usr/share/texlive/texmf-dist/tex/generic/pgf/utilities/pgfutil-common.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/utilities/pgfutil-latex.def) (/usr/share/texlive/texmf-dist/tex/generic/pgf/utilities/pgfrcs.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/pgf.revision.tex))) (/usr/share/texlive/texmf-dist/tex/latex/pgf/utilities/pgfkeys.sty (/usr/share/texlive/texmf-dist/tex/generic/pgf/utilities/pgfkeys.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/utilities/pgfkeyslibraryfiltered .code.tex))) (/usr/share/texlive/texmf-dist/tex/latex/pgf/math/pgfmath.sty (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmath.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathutil.code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathparser.code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.basic.code .tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.trigonomet ric.code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.random.cod e.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.comparison .code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.base.code. tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.round.code .tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.misc.code. tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.integerari thmetics.code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathcalc.code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfmathfloat.code.tex))) (/usr/share/texlive/texmf-dist/tex/generic/pgf/utilities/pgffor.code.tex)) `PSTricks' v3.22A <2025/12/13> (tvz,hv) --- We are running latex or xelatex --- (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pstricks.con) (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pstricks-color.tex) (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pstricks-arrows.tex) (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pstricks-dots.tex) (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pst-code-grid.tex) (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pst-code-box.tex) (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pst-code-arc.tex) (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pst-code-circle_ellipse.tex ) (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pst-code-ref_rot.tex) (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pst-code-put.tex) (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pst-code-pspicture.tex) (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pstricks.con)) (/usr/share/texlive/texmf-dist/tex/generic/pstricks/pst-fp.tex `pst-fp' v0.06, 2020/11/20 (hv))) (/usr/share/texmf/tex/latex/preview/preview.sty) (/usr/share/texlive/texmf-dist/tex/latex/environ/environ.sty (/usr/share/texlive/texmf-dist/tex/latex/trimspaces/trimspaces.sty)))) (/usr/share/texlive/texmf-dist/tex/generic/thumbpdf/thumbpdf.sty) (/usr/share/texlive/texmf-dist/tex/latex/mathtools/mathtools.sty (/usr/share/texlive/texmf-dist/tex/latex/tools/calc.sty) (/usr/share/texlive/texmf-dist/tex/latex/mathtools/mhsetup.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty))) (/usr/share/texlive/texmf-dist/tex/latex/bbm-macros/bbm.sty) (/usr/share/texlive/texmf-dist/tex/latex/pgf/frontendlayer/tikz.sty (/usr/share/texlive/texmf-dist/tex/latex/pgf/basiclayer/pgf.sty (/usr/share/texlive/texmf-dist/tex/latex/pgf/basiclayer/pgfcore.sty (/usr/share/texlive/texmf-dist/tex/latex/pgf/systemlayer/pgfsys.sty (/usr/share/texlive/texmf-dist/tex/generic/pgf/systemlayer/pgfsys.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/systemlayer/pgf.cfg) (/usr/share/texlive/texmf-dist/tex/generic/pgf/systemlayer/pgfsys-pdftex.def (/usr/share/texlive/texmf-dist/tex/generic/pgf/systemlayer/pgfsys-common-pdf.de f))) (/usr/share/texlive/texmf-dist/tex/generic/pgf/systemlayer/pgfsyssoftpath.code. tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/systemlayer/pgfsysprotocol.code. tex)) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcore.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/math/pgfint.code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcorepoints.code.te x) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcorepathconstruct. code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcorepathusage.code .tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcorescopes.code.te x) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcoregraphicstate.c ode.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcoretransformation s.code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcorequick.code.tex ) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcoreobjects.code.t ex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcorepathprocessing .code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcorearrows.code.te x) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcoreshade.code.tex ) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcoreimage.code.tex ) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcoreexternal.code. tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcorelayers.code.te x) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcoretransparency.c ode.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcorepatterns.code. tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/basiclayer/pgfcorerdf.code.tex)) ) (/usr/share/texlive/texmf-dist/tex/generic/pgf/modules/pgfmoduleshapes.code.tex ) (/usr/share/texlive/texmf-dist/tex/generic/pgf/modules/pgfmoduleplot.code.tex ) (/usr/share/texlive/texmf-dist/tex/latex/pgf/compatibility/pgfcomp-version-0-65 .sty) (/usr/share/texlive/texmf-dist/tex/latex/pgf/compatibility/pgfcomp-version-1-18 .sty)) (/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/tikz.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/libraries/pgflibraryplothandlers .code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/modules/pgfmodulematrix.code.tex ) (/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik zlibrarytopaths.code.tex))) (/usr/share/texlive/texmf-dist/tex/latex/forest/forest.sty (/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik zlibraryshapes.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik zlibraryshapes.geometric.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/libraries/shapes/pgflibraryshape s.geometric.code.tex)) (/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik zlibraryshapes.misc.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/libraries/shapes/pgflibraryshape s.misc.code.tex)) (/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik zlibraryshapes.symbols.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/libraries/shapes/pgflibraryshape s.symbols.code.tex)) (/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik zlibraryshapes.arrows.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/libraries/shapes/pgflibraryshape s.arrows.code.tex)) (/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik zlibraryshapes.callouts.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/libraries/shapes/pgflibraryshape s.callouts.code.tex)) (/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik zlibraryshapes.multipart.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/libraries/shapes/pgflibraryshape s.multipart.code.tex))) (/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik zlibraryfit.code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/frontendlayer/tikz/libraries/tik zlibrarycalc.code.tex) (/usr/share/texlive/texmf-dist/tex/generic/pgf/libraries/pgflibraryintersection s.code.tex (/usr/share/texlive/texmf-dist/tex/generic/pgf/libraries/pgflibraryfpu.code.tex )) (/usr/share/texlive/texmf-dist/tex/latex/pgfopts/pgfopts.sty) (/usr/share/texlive/texmf-dist/tex/latex/elocalloc/elocalloc.sty) (/usr/share/texlive/texmf-dist/tex/latex/l3packages/xparse/xparse.sty (/usr/share/texlive/texmf-dist/tex/latex/l3kernel/expl3.sty (/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def))) (/usr/share/texlive/texmf-dist/tex/latex/inlinedef/inlinedef.sty)) (/usr/share/texlive/texmf-dist/tex/latex/tools/array.sty) (/usr/share/texlive/texmf-dist/tex/latex/booktabs/booktabs.sty) (/usr/share/texlive/texmf-dist/tex/latex/caption/subcaption.sty (/usr/share/texlive/texmf-dist/tex/latex/caption/caption.sty (/usr/share/texlive/texmf-dist/tex/latex/caption/caption3.sty))) (/usr/share/texlive/texmf-dist/tex/latex/threeparttable/threeparttable.sty) (/home/hornik/tmp/R.check/r-release-gcc/Work/build/share/texmf/tex/latex/Sweave .sty (/usr/share/texlive/texmf-dist/tex/latex/base/ifthen.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/fontenc.sty (/usr/share/texmf/tex/latex/lm/t1lmr.fd)) Environment Schunk is already defined, stay with former definition) (./lmSubsets.aux) (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (./lmSubsets.out) (./lmSubsets.out) (/usr/share/texmf/tex/latex/lm/t1lmss.fd) (/usr/share/texmf/tex/latex/lm/ot1lmr.fd) (/usr/share/texmf/tex/latex/lm/omllmm.fd) (/usr/share/texmf/tex/latex/lm/omslmsy.fd) (/usr/share/texmf/tex/latex/lm/omxlmex.fd) ! Undefined control sequence. <argument> cite.\@citeb \@extra@b@citeb l.122 \begin{document} ? ! Emergency stop. <argument> cite.\@citeb \@extra@b@citeb l.122 \begin{document} ! ==> Fatal error occurred, no output PDF file produced! Transcript written on lmSubsets.log. make[1]: *** [Makefile:5: all] Error 1 make[1]: Leaving directory '/home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/lmSubsets.Rcheck/vign_test/lmSubsets/vignettes' Error in tools::buildVignettes(dir = "/home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/lmSubsets.Rcheck/vign_test/lmSubsets", : running 'make' failed Execution halted Flavor: r-release-linux-x86_64

Need mirroring services?
Contact our team at info@vpspulse.com.

Mirror powered by VPSpulse

Infrastructure sponsored by VPSPulse & Secure Payments by ArionPay.