Package: LncFinder
Type: Package
Title: LncRNA Identification and Analysis Using Heterologous Features
Version: 1.1.6
Authors@R: c(
    person(family = "Han", given = "Siyu", email = "siyu.han@tum.de", role = c("aut", "cre")),
    person(family = "Li", given = "Ying", email = "liying@jlu.edu.cn", role = "aut"),
    person(family = "Liang", given = "Yanchun", role = "aut"))
Maintainer: Siyu Han <siyu.han@tum.de>
Acknowledgments: CHENG Ming, FAN Linrui, GUO Yuan, LI Yaolong, SUN
        Ying, WANG Ruoyu
Description: Long non-coding RNAs identification and analysis. Default models are trained with human, mouse and wheat datasets by employing SVM. Features are based on intrinsic composition of sequence, EIIP value (electron-ion interaction pseudopotential), and secondary structure. This package can also extract other classic features and build new classifiers. Reference: Han S., et al. (2019) <doi:10.1093/bib/bby065>.
URL: https://lncfinder.osubmi.org/
License: GPL-3
Depends: R (>= 2.10)
Imports: seqinr (>= 2.1-3), e1071 (>= 1.0), parallel (>= 2.1.0), caret
        (>= 6.0-71),
LazyData: true
Encoding: UTF-8
RoxygenNote: 7.2.3
NeedsCompilation: no
Author: Siyu Han [aut, cre],
  Ying Li [aut],
  Yanchun Liang [aut]
Packaged: 2024-09-28 20:03:52 UTC; alexh
Repository: CRAN
Date/Publication: 2024-09-28 23:00:02 UTC
Built: R 4.5.3; ; 2026-06-10 05:36:00 UTC; windows
