Nestimate-package	Nestimate-package
.auto_detect_clusters	dot-auto_detect_clusters
.build_cluster_lookup	dot-build_cluster_lookup
.build_from_transitions	dot-build_from_transitions
.build_mcml_edgelist	dot-build_mcml_edgelist
.build_mcml_sequence	dot-build_mcml_sequence
.detect_mcml_input	dot-detect_mcml_input
.process_weights	dot-process_weights
action_to_onehot	action_to_onehot
actor_endpoints	actor_endpoints
ai_long	long-data
as.data.frame.net_cluster_diagnostics	cluster_diagnostics
as.data.frame.state_freq	state_freq
association_rules	association_rules
as_tna	as_tna
as_tna.default	as_tna
as_tna.mcml	as_tna
betti_numbers	betti_numbers
bipartite_groups	bipartite_groups
bootstrap_network	bootstrap_network
boot_glasso	boot_glasso
bottleneck_distance	bottleneck_distance
build_atna	build_atna
build_clusters	build_clusters
build_cna	build_cna
build_cor	build_cor
build_ftna	build_ftna
build_gimme	build_gimme
build_glasso	build_glasso
build_hon	build_hon
build_honem	build_honem
build_hypa	build_hypa
build_hypergraph	build_hypergraph
build_ising	build_ising
build_mcml	build_mcml
build_mlvar	build_mlvar
build_mmm	build_mmm
build_mogen	build_mogen
build_network	build_network
build_pcor	build_pcor
build_simplicial	build_simplicial
build_tna	build_tna
casedrop_reliability	casedrop_reliability
centrality_stability	centrality_stability
chain_structure	chain_structure
chatgpt_srl	chatgpt_srl
check_val_in_range	check_val_in_range
clique_expansion	clique_expansion
cluster_choice	cluster_choice
cluster_data	cluster_data
cluster_diagnostics	cluster_diagnostics
cluster_mmm	cluster_mmm
cluster_network	cluster_network
cluster_summary	cluster_summary
coefs	coefs
coefs.default	coefs
coefs.net_mlvar	coefs
compare_mmm	compare_mmm
compare_model	compare_model
compare_model.cograph_network	compare_model
compare_model.matrix	compare_model
compare_model.netobject	compare_model
compare_model.netobject_group	compare_model.netobject_group
convert_sequence_format	convert_sequence_format
cooccurrence	cooccurrence
data_conversion	data_conversion
distribution_plot	distribution_plot
estimate_network	estimate_network
euler_characteristic	euler_characteristic
evaluate_links	evaluate_links
extraction	extraction
extract_edges	extract_edges
extract_initial_probs	extract_initial_probs
extract_transition_matrix	extract_transition_matrix
frequencies	frequencies
get_estimator	get_estimator
group_regulation_long	group_regulation_long
human_long	long-data
hypergraph_centrality	hypergraph_centrality
hypergraph_measures	hypergraph_measures
learning_activities	learning_activities
list_estimators	list_estimators
long-data	long-data
long_to_wide	long_to_wide
magnitude_difference	magnitude_difference
markov_order_test	markov_order_test
markov_stability	markov_stability
mark_first_state	mark_first_state
mark_terminal_state	mark_terminal_state
mogen_transitions	mogen_transitions
mosaic_plot	mosaic_plot
mosaic_plot.default	mosaic_plot
mosaic_plot.htna	mosaic_plot
mosaic_plot.matrix	mosaic_plot
mosaic_plot.mcml	mosaic_plot
mosaic_plot.netobject	mosaic_plot
mosaic_plot.netobject_group	mosaic_plot
mosaic_plot.table	mosaic_plot
nct	nct
Nestimate	Nestimate-package
network_reliability	network_reliability
net_aggregate_weights	net_aggregate_weights
net_centrality	net_centrality
passage_time	passage_time
pathways	pathways
pathways.netobject	pathways
pathways.net_association_rules	pathways
pathways.net_hon	pathways
pathways.net_hypa	pathways
pathways.net_link_prediction	pathways
pathways.net_mogen	pathways
path_counts	path_counts
path_dependence	path_dependence
permutation	permutation
persistence_landscape	persistence_landscape
persistent_homology	persistent_homology
plot.boot_glasso	plot.boot_glasso
plot.chain_structure	plot.chain_structure
plot.cluster_choice	plot.cluster_choice
plot.magnitude_difference	magnitude_difference
plot.mmm_compare	plot.mmm_compare
plot.net_association_rules	plot.net_association_rules
plot.net_casedrop_reliability	casedrop_reliability
plot.net_casedrop_reliability_group	casedrop_reliability
plot.net_clustering	plot.net_clustering
plot.net_cluster_diagnostics	plot.net_cluster_diagnostics
plot.net_comparison	plot.net_comparison
plot.net_gimme	plot.net_gimme
plot.net_honem	plot.net_honem
plot.net_markov_order	plot.net_markov_order
plot.net_markov_stability	markov_stability
plot.net_mmm	plot.net_mmm
plot.net_mmm_clustering	plot.net_mmm_clustering
plot.net_mogen	plot.net_mogen
plot.net_mpt	passage_time
plot.net_path_dependence	plot.net_path_dependence
plot.net_reliability	plot.net_reliability
plot.net_sequence_comparison	plot.net_sequence_comparison
plot.net_stability	plot.net_stability
plot.net_transition_entropy	plot.net_transition_entropy
plot.persistence_landscape	plot.persistence_landscape
plot.persistent_homology	plot.persistent_homology
plot.q_analysis	plot.q_analysis
plot.simplicial_complex	plot.simplicial_complex
plot.state_freq	state_freq
plot_mosaic	plot_mosaic
plot_state_frequencies	plot_state_frequencies
plot_state_frequencies.default	plot_state_frequencies
plot_state_frequencies.htna	plot_state_frequencies
plot_state_frequencies.mcml	plot_state_frequencies
plot_state_frequencies.netobject	plot_state_frequencies
plot_state_frequencies.netobject_group	plot_state_frequencies
predictability	predictability
predictability.netobject	predictability
predictability.netobject_group	predictability
predictability.netobject_ml	predictability
predict_links	predict_links
prepare	prepare
prepare_for_tna	prepare_for_tna
prepare_onehot	prepare_onehot
print.boot_glasso	print.boot_glasso
print.chain_structure	print.chain_structure
print.chain_structure_group	print.chain_structure_group
print.cluster_choice	print.cluster_choice
print.hypergraph_measures	hypergraph_measures
print.magnitude_difference	magnitude_difference
print.mcml	print.mcml
print.mcml_layer	print.mcml_layer
print.mmm_compare	print.mmm_compare
print.nestimate_data	print.nestimate_data
print.netobject	print.netobject
print.netobject_group	print.netobject_group
print.netobject_ml	print.netobject_ml
print.net_association_rules	print.net_association_rules
print.net_bootstrap	print.net_bootstrap
print.net_bootstrap_group	print.net_bootstrap_group
print.net_casedrop_reliability	casedrop_reliability
print.net_casedrop_reliability_group	casedrop_reliability
print.net_clustering	print.net_clustering
print.net_cluster_diagnostics	print.net_cluster_diagnostics
print.net_gimme	print.net_gimme
print.net_hon	print.net_hon
print.net_honem	print.net_honem
print.net_hypa	print.net_hypa
print.net_hypergraph	build_hypergraph
print.net_link_prediction	print.net_link_prediction
print.net_markov_order	print.net_markov_order
print.net_markov_order_group	print.net_markov_order_group
print.net_markov_stability_group	print.net_markov_stability_group
print.net_mlvar	print.net_mlvar
print.net_mmm	print.net_mmm
print.net_mmm_clustering	print.net_mmm_clustering
print.net_mogen	print.net_mogen
print.net_mpt_group	print.net_mpt_group
print.net_nct	print.net_nct
print.net_path_dependence	print.net_path_dependence
print.net_permutation	print.net_permutation
print.net_permutation_group	print.net_permutation_group
print.net_reliability	print.net_reliability
print.net_sequence_comparison	print.net_sequence_comparison
print.net_stability	print.net_stability
print.net_stability_group	print.net_stability_group
print.net_transition_entropy	print.net_transition_entropy
print.net_transition_entropy_group	print.net_transition_entropy_group
print.persistence_landscape	print.persistence_landscape
print.persistent_homology	print.persistent_homology
print.q_analysis	print.q_analysis
print.simplicial_complex	print.simplicial_complex
print.state_freq	state_freq
print.summary.net_casedrop_reliability_group	casedrop_reliability
print.summary.net_path_dependence	print.summary.net_path_dependence
print.summary.net_transition_entropy	print.summary.net_transition_entropy
print.summary_chain_structure	print.summary_chain_structure
print.tidy_covariates	print.tidy_covariates
print.wtna_boot_mixed	print.wtna_boot_mixed
print.wtna_mixed	print.wtna_mixed
print.wtna_perm_mixed	print.wtna_perm_mixed
q_analysis	q_analysis
register_estimator	register_estimator
remove_estimator	remove_estimator
rename_models	rename_models
rename_models.default	rename_models
rename_models.netobject_group	rename_models
safe_mean	safe_mean
safe_median	safe_median
safe_sd	safe_sd
sequence_compare	sequence_compare
sequence_plot	sequence_plot
simplicial_degree	simplicial_degree
srl_strategies	srl_strategies
state_distribution	state_distribution
state_distribution.default	state_distribution
state_distribution.htna	state_distribution
state_distribution.mcml	state_distribution
state_distribution.netobject	state_distribution
state_distribution.netobject_group	state_distribution
state_freq	state_freq
state_frequencies	state_frequencies
summary.boot_glasso	summary.boot_glasso
summary.chain_structure	summary.chain_structure
summary.chain_structure_group	summary.chain_structure_group
summary.cluster_choice	summary.cluster_choice
summary.mcml	summary.mcml
summary.mmm_compare	summary.mmm_compare
summary.nest_initial_probs	summary.nest_initial_probs
summary.nest_transition_counts	summary.nest_transition_counts
summary.nest_transition_matrix	summary.nest_transition_matrix
summary.netobject	summary.netobject
summary.netobject_group	summary.netobject_group
summary.net_association_rules	summary.net_association_rules
summary.net_bootstrap	summary.net_bootstrap
summary.net_bootstrap_group	summary.net_bootstrap_group
summary.net_casedrop_reliability	casedrop_reliability
summary.net_casedrop_reliability_group	casedrop_reliability
summary.net_clustering	summary.net_clustering
summary.net_gimme	summary.net_gimme
summary.net_hon	summary.net_hon
summary.net_honem	summary.net_honem
summary.net_hypa	summary.net_hypa
summary.net_hypergraph	build_hypergraph
summary.net_link_prediction	summary.net_link_prediction
summary.net_markov_order	summary.net_markov_order
summary.net_mlvar	summary.net_mlvar
summary.net_mmm	summary.net_mmm
summary.net_mogen	summary.net_mogen
summary.net_mpt	passage_time
summary.net_nct	summary.net_nct
summary.net_path_dependence	summary.net_path_dependence
summary.net_permutation	summary.net_permutation
summary.net_permutation_group	summary.net_permutation_group
summary.net_reliability	summary.net_reliability
summary.net_sequence_comparison	summary.net_sequence_comparison
summary.net_stability	summary.net_stability
summary.net_stability_group	summary.net_stability_group
summary.net_transition_entropy	summary.net_transition_entropy
summary.wtna_boot_mixed	summary.wtna_boot_mixed
summary.wtna_perm_mixed	summary.wtna_perm_mixed
trajectories	trajectories
transition_entropy	transition_entropy
utils	utils
verify_simplicial	verify_simplicial
wide_to_long	wide_to_long
wtna	wtna
