# Microstructure Information from Diffusion Imaging

## Documentation for package ‘midi’ version 0.1.0

- DESCRIPTION file
- Package NEWS
- Package README

## Help Pages

autoplot.bundle | Plots a cross section of a cylinder bundle using *ggplot2*
CallaghanCompartment | Callaghan's model for restricted diffusion in a cylinder
CylinderBundleCompartment | Cylinder bundle compartment class
CylinderCompartment | Cylinder compartment class
CylinderRadialCompartment | Cylinder radial compartment class
NeumanCompartment | Neuman's model for restricted diffusion in a cylinder
plot.bundle | Plots a cross section of a cylinder bundle
plot3d | Plots a 3D representation of a cylinder bundle using *plotly*
run_app | Runs the MIDI Shiny web application
simulate_bundle | Generates a cross section of a cylinder bundle
SodermanCompartment | Soderman's model for restricted diffusion in a cylinder
StaniszCompartment | Stanisz's model for restricted diffusion in a cylinder
VanGelderenCompartment | Van Gelderen's model for restricted diffusion in a cylinder