# Partial Least Squares Regression for Cox Models and Related Techniques

## Documentation for package ‘plsRcox’ version 1.8.2

- DESCRIPTION file.

## Help Pages

coxDKpls2DR | Fitting a Direct Kernel PLS model on the (Deviance) Residuals
coxDKpls2DR.default | Fitting a Direct Kernel PLS model on the (Deviance) Residuals
coxDKpls2DR.formula | Fitting a Direct Kernel PLS model on the (Deviance) Residuals
coxDKplsDR | Fitting a Direct Kernel PLS model on the (Deviance) Residuals
coxDKplsDR.default | Fitting a Direct Kernel PLS model on the (Deviance) Residuals
coxDKplsDR.formula | Fitting a Direct Kernel PLS model on the (Deviance) Residuals
coxDKsplsDR | Fitting a Direct Kernel sPLSR model on the (Deviance) Residuals
coxDKsplsDR.default | Fitting a Direct Kernel sPLSR model on the (Deviance) Residuals
coxDKsplsDR.formula | Fitting a Direct Kernel sPLSR model on the (Deviance) Residuals
coxpls | Fitting a Cox-Model on PLSR components
coxpls.default | Fitting a Cox-Model on PLSR components
coxpls.formula | Fitting a Cox-Model on PLSR components
coxpls2 | Fitting a Cox-Model on PLSR components
coxpls2.default | Fitting a Cox-Model on PLSR components
coxpls2.formula | Fitting a Cox-Model on PLSR components
coxpls2DR | Fitting a PLSR model on the (Deviance) Residuals
coxpls2DR.default | Fitting a PLSR model on the (Deviance) Residuals
coxpls2DR.formula | Fitting a PLSR model on the (Deviance) Residuals
coxpls3 | Fitting a Cox-Model on PLSR components
coxpls3.default | Fitting a Cox-Model on PLSR components
coxpls3.formula | Fitting a Cox-Model on PLSR components
coxpls3DR | Fitting a PLSR model on the (Deviance) Residuals
coxpls3DR.default | Fitting a PLSR model on the (Deviance) Residuals
coxpls3DR.formula | Fitting a PLSR model on the (Deviance) Residuals
coxplsDR | Fitting a PLSR model on the (Deviance) Residuals
coxplsDR.default | Fitting a PLSR model on the (Deviance) Residuals
coxplsDR.formula | Fitting a PLSR model on the (Deviance) Residuals
coxsplsDR | Fitting a sPLSR model on the (Deviance) Residuals
coxsplsDR.default | Fitting a sPLSR model on the (Deviance) Residuals
coxsplsDR.formula | Fitting a sPLSR model on the (Deviance) Residuals
cv.autoplsRcox | Cross-validating an autoplsRcox-Model
cv.coxDKplsDR | Cross-validating a DKplsDR-Model
cv.coxDKsplsDR | Cross-validating a DKsplsDR-Model
cv.coxpls | Cross-validating a Cox-Model fitted on PLSR components
cv.coxplsDR | Cross-validating a plsDR-Model
cv.coxsplsDR | Cross-validating a splsDR-Model
cv.larsDR | Cross-validating a larsDR-Model
cv.plsRcox | Cross-validating a plsRcox-Model
DKplsRcox | Partial least squares Regression generalized linear models
DKplsRcoxmodel | Partial least squares Regression generalized linear models
DKplsRcoxmodel.default | Partial least squares Regression generalized linear models
DKplsRcoxmodel.formula | Partial least squares Regression generalized linear models
DR_coxph | (Deviance) Residuals Computation
larsDR_coxph | Fitting a LASSO/LARS model on the (Deviance) Residuals
larsDR_coxph.default | Fitting a LASSO/LARS model on the (Deviance) Residuals
larsDR_coxph.formula | Fitting a LASSO/LARS model on the (Deviance) Residuals
micro.censure | Microsat features and survival times
plsRcox | Partial least squares Regression generalized linear models
plsRcoxmodel | Partial least squares Regression generalized linear models
plsRcoxmodel.default | Partial least squares Regression generalized linear models
plsRcoxmodel.formula | Partial least squares Regression generalized linear models
predict.coxDKsplsDRmodel | Predict method for DR-based Cox component models
predict.coxDRmodel | Predict method for DR-based Cox component models
predict.coxplsDRmodel | Predict method for DR-based Cox component models
predict.coxsplsDRmodel | Predict method for DR-based Cox component models
predict.plsRcoxmodel | Print method for plsRcox models
print.plsRcoxmodel | Print method for plsRcox models
print.summary.plsRcoxmodel | Print method for summaries of plsRcox models
summary.plsRcoxmodel | Summary method for plsRcox models
Xmicro.censure_compl_imp | Imputed Microsat features