Package: DCLEAR
Version: 1.0.13
Date: 2023-9-14
Title: Distance Based Cell Lineage Reconstruction
Authors@R: c(person("Il-Youp", "Kwak", role = c("aut", "cre"),
                     email = "ikwak2@cau.ac.kr"),
              person("Wuming", "Gong", role = "aut", email = "gongx030@umn.edu"))
Author: Il-Youp Kwak [aut, cre],
  Wuming Gong [aut]
Maintainer: Il-Youp Kwak <ikwak2@cau.ac.kr>
License: GPL-3
VignetteBuilder: knitr
LinkingTo: Rcpp, RcppArmadillo
RoxygenNote: 7.2.3
Depends: R (>= 4.1.0), tensorflow(>= 2.2.0)
biocViews:
Encoding: UTF-8
Imports: BiocParallel, dplyr, Matrix, matrixStats, ape, phangorn, Rcpp,
        igraph, methods, purrr, stringr, tidyr, rBayesianOptimization,
        rlang, BiocGenerics
Suggests: knitr, rmarkdown, markdown
Description: R codes for distance based cell lineage reconstruction. Our methods won both sub-challenges 2 and 3 of the Allen Institute Cell Lineage Reconstruction DREAM Challenge in 2020. 
        References: Gong et al. (2021) <doi:10.1016/j.cels.2021.05.008>, Gong et al. (2022) <doi:10.1186/s12859-022-04633-x>. 
URL: https://github.com/ikwak2/DCLEAR
NeedsCompilation: yes
Packaged: 2023-09-14 07:01:28 UTC; ikwak2
Repository: CRAN
Date/Publication: 2023-09-14 07:32:35 UTC
Built: R 4.4.0; x86_64-apple-darwin20; 2024-06-01 15:03:26 UTC; unix
Archs: DCLEAR.so.dSYM
