add_noise	add_noise
B_mats	B_mats
B_to_phylotree	B_to_phylotree
combine_trees	combine_trees
create_B	create_B
create_F	create_F
create_instance	create_instance
create_phylotree	create_phylotree
create_U	create_U
equals	equals
find_common_subtrees	find_common_subtrees
palettes	palettes
Phylotree-class	Phylotree-class
plot	plot
plot,Phylotree-method	plot
plot_proportions	plot_proportions
