Package: GTEs
Type: Package
Title: Group Technical Effects
Version: 1.0.0
Language: en-US
Date: 2025-02-20
Maintainer: Yang Zhou <yangz@stu.hit.edu.cn>
Authors@R: person(given = "Yang",
                  family = "Zhou",
                  role = c("aut", "cre"),
                  email = "yangz@stu.hit.edu.cn")
Description: Implementation of the GTE (Group Technical Effects) model for single-cell data. GTE is a quantitative metric to assess batch effects for individual genes in single-cell data. For a single-cell dataset, the user can calculate the GTE value for individual features (such as genes), and then identify the highly batch-sensitive features. Removing these highly batch-sensitive features results in datasets with low batch effects.
License: GPL-3
Encoding: UTF-8
Depends: R (>= 4.0.0)
Imports: stats, Matrix, matrixStats, Rcpp, RcppEigen, dplyr
LinkingTo: Rcpp (>= 1.0.8), RcppEigen
RoxygenNote: 7.2.3
NeedsCompilation: yes
URL: https://github.com/yzhou1999/GTEs,
        https://yzhou1999.github.io/GTEs/
BugReports: https://github.com/yzhou1999/GTEs/issues
Packaged: 2025-02-26 07:54:16 UTC; server
Author: Yang Zhou [aut, cre]
Repository: CRAN
Date/Publication: 2025-02-27 16:50:10 UTC
Built: R 4.5.0; aarch64-apple-darwin20; 2025-04-02 03:56:10 UTC; unix
Archs: GTEs.so.dSYM
